RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 SDHAF2Q9NX18 166 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 RABL2AQ9UBK7 228 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-220ENST00000561253 VPREB3Q9UKI3 123 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 RABL2BQ9UNT1 228 aa4.68□□□□□ -1.66
LRRC28-220ENST00000561253 AMMECR1Q9Y4X0 333 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-220ENST00000561253 IGHV3-72A0A0B4J1Y9 119 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 FABP12A6NFH5 140 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 OR5H14A6NHG9 310 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 H0YJW9 148 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 RAB29O14966 203 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 PPYP01298 95 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 PMP2P02689 132 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 GAPDHP04406 335 aaKnown RBP4.67□□□□□ -1.66
LRRC28-220ENST00000561253 CD1BP29016 333 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 GNRHRP30968 328 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 FCGR2CP31995 323 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 DUTP33316 252 aaKnown RBP4.67□□□□□ -1.66
LRRC28-220ENST00000561253 CEACAM3P40198 252 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 TAS2R46P59540 309 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 ACTBP60709 375 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 HERV-K104P61576 105 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 RPL30P62888 115 aaKnown RBP4.67□□□□□ -1.66
LRRC28-220ENST00000561253 ACTG1P63261 375 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 IL18Q14116 193 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 MRGPRG-AS1Q2M3A8 158 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 C16orf87Q6PH81 154 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 FAM219AQ8IW50 185 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 LYG1Q8N1E2 194 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-220ENST00000561253 TMEM229BQ8NBD8 167 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 OR4C16Q8NGL9 310 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 OR56B4Q8NH76 319 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 TOMM40LQ969M1 308 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 RPEQ96AT9 228 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 CITED2Q99967 270 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-220ENST00000561253 OR2D2Q9H210 308 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 Q9H8V8 135 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 IFT46Q9NQC8 304 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 NECAP2Q9NVZ3 263 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 SLC2A8Q9NY64 477 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 EHFQ9NZC4 300 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 PIPOXQ9P0Z9 390 aa4.67□□□□□ -1.66
LRRC28-220ENST00000561253 SRRM4A7MD48 611 aaKnown RBP4.66□□□□□ -1.66
LRRC28-220ENST00000561253 TXNL1O43396 289 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 RBBP9O75884 186 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 OR2F2O95006 317 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 NDUFA7O95182 113 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 IGLV2-23P01705 113 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 IGKV1-16P04430 117 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 IL3RAP26951 378 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 LUMP51884 338 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-220ENST00000561253 ARPC4P59998 168 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 LY6EQ16553 131 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 FAAP20Q6NZ36 180 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 FAM131AQ6UXB0 335 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF818PQ6ZRF7 136 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 TGIF2LXQ8IUE1 241 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 Q8N402 240 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 ARRDC1Q8N5I2 433 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 FAM71E2Q8N5Q1 922 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF645Q8N7E2 425 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 GDPD1Q8N9F7 314 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 Q8N9W7 124 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 DRAXINQ8NBI3 349 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-220ENST00000561253 OR13C8Q8NGS7 320 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 OR5H2Q8NGV7 314 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 RBM14Q96PK6 669 aaKnown RBP4.66□□□□□ -1.66
LRRC28-220ENST00000561253 GINS4Q9BRT9 223 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF702PQ9H963 129 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 GSN-AS1Q9NRJ2 163 aa4.66□□□□□ -1.66
LRRC28-220ENST00000561253 TMEM89A2RUT3 159 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 M0R1X1 148 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 PLA2G10O15496 165 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 DFFBO76075 338 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 SLC22A5O76082 557 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 NDUFA3O95167 84 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 RAB3DO95716 219 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 IGKV1D-33P01593 117 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 IGKV1-33P01594 117 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 CRYGBP07316 175 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 IL7P13232 177 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 CNTFRP26992 372 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 BRS3P32247 399 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 S100A5P33763 92 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 BTCP35070 178 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 TAS2R19P59542 299 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 BLCAPP62952 87 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 IFITM3Q01628 133 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF45Q02386 682 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 ACTBL2Q562R1 376 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 RNASE10Q5GAN6 216 aaKnown RBP4.65□□□□□ -1.67
LRRC28-220ENST00000561253 SPANXN2Q5MJ10 180 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 STEAP1BQ6NZ63 245 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 C11orf88Q6PI97 169 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 MOB3BQ86TA1 216 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 C5orf56Q8N8D9 126 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 NPBQ8NG41 125 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 DEDD2Q8WXF8 326 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 S1PR3Q99500 378 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF2Q9BSG1 426 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms