RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 OR4A16Q8NH70 328 aa9.02□□□□□ -0.97
USP3-218ENST00000560202 DCUN1D4Q92564 292 aa9.02□□□□□ -0.97
USP3-218ENST00000560202 SMIM8Q96KF7 97 aa9.02□□□□□ -0.97
USP3-218ENST00000560202 MAGT1Q9H0U3 335 aa9.02□□□□□ -0.97
USP3-218ENST00000560202 BET1LQ9NYM9 111 aa9.02□□□□□ -0.97
USP3-218ENST00000560202 FAM90A26D6RGX4 464 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 UPK2O00526 184 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 SMAD7O15105 426 aaKnown RBP9.01□□□□□ -0.97
USP3-218ENST00000560202 IGLV2-23P01705 113 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 OR2B8PP59922 312 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 RAB4BP61018 213 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 C2CD4CQ8TF44 421 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 RNF5Q99942 180 aa9.01□□□□□ -0.97
USP3-218ENST00000560202 QTRT1Q9BXR0 403 aaKnown RBP9.01□□□□□ -0.97
USP3-218ENST00000560202 RCL1Q9Y2P8 373 aaKnown RBP9.01□□□□□ -0.97
USP3-218ENST00000560202 PRRC2AP48634 2157 aaKnown RBP9.01□□□□□ -0.97
USP3-218ENST00000560202 E5RGE8 158 aa9□□□□□ -0.97
USP3-218ENST00000560202 AP4M1O00189 453 aa9□□□□□ -0.97
USP3-218ENST00000560202 SSSCA1O60232 199 aa9□□□□□ -0.97
USP3-218ENST00000560202 MOSP00540 346 aa9□□□□□ -0.97
USP3-218ENST00000560202 IGKV1D-33P01593 117 aa9□□□□□ -0.97
USP3-218ENST00000560202 IGKV1-33P01594 117 aa9□□□□□ -0.97
USP3-218ENST00000560202 CD5P06127 495 aa9□□□□□ -0.97
USP3-218ENST00000560202 CD24P25063 80 aa9□□□□□ -0.97
USP3-218ENST00000560202 MAS1LP35410 378 aa9□□□□□ -0.97
USP3-218ENST00000560202 UBE2KP61086 200 aa9□□□□□ -0.97
USP3-218ENST00000560202 TNFRSF9Q07011 255 aa9□□□□□ -0.97
USP3-218ENST00000560202 VMA21Q3ZAQ7 101 aa9□□□□□ -0.97
USP3-218ENST00000560202 AARDQ4LEZ3 155 aa9□□□□□ -0.97
USP3-218ENST00000560202 SLC16A13Q7RTY0 426 aa9□□□□□ -0.97
USP3-218ENST00000560202 VSTM2AQ8TAG5 236 aa9□□□□□ -0.97
USP3-218ENST00000560202 HSPB7Q9UBY9 170 aa9□□□□□ -0.97
USP3-218ENST00000560202 A0A0U1RQK1 487 aa9□□□□□ -0.97
USP3-218ENST00000560202 C15orf61A6NNL5 157 aa9□□□□□ -0.97
USP3-218ENST00000560202 KCNAB3O43448 404 aa9□□□□□ -0.97
USP3-218ENST00000560202 SYNGR2O43760 224 aa9□□□□□ -0.97
USP3-218ENST00000560202 SLC25A17O43808 307 aa9□□□□□ -0.97
USP3-218ENST00000560202 CHST1O43916 411 aa9□□□□□ -0.97
USP3-218ENST00000560202 FBXO24O75426 580 aa9□□□□□ -0.97
USP3-218ENST00000560202 KBTBD11O94819 623 aa9□□□□□ -0.97
USP3-218ENST00000560202 IFNA10P01566 189 aa9□□□□□ -0.97
USP3-218ENST00000560202 SNRNP70P08621 437 aaKnown RBP9□□□□□ -0.97
USP3-218ENST00000560202 FAM157CP0CG43 387 aa9□□□□□ -0.97
USP3-218ENST00000560202 CNTFRP26992 372 aa9□□□□□ -0.97
USP3-218ENST00000560202 BRS3P32247 399 aa9□□□□□ -0.97
USP3-218ENST00000560202 HNF4GQ14541 408 aa9□□□□□ -0.97
USP3-218ENST00000560202 PSG5Q15238 335 aa9□□□□□ -0.97
USP3-218ENST00000560202 ZNF429Q86V71 674 aa9□□□□□ -0.97
USP3-218ENST00000560202 OR2T10Q8NGZ9 312 aa9□□□□□ -0.97
USP3-218ENST00000560202 OR4A5Q8NH83 315 aa9□□□□□ -0.97
USP3-218ENST00000560202 TMEM167AQ8TBQ9 72 aa9□□□□□ -0.97
USP3-218ENST00000560202 HIST1H2BAQ96A08 127 aa9□□□□□ -0.97
USP3-218ENST00000560202 EAF1Q96JC9 268 aaPredicted RBP9□□□□□ -0.97
USP3-218ENST00000560202 C11orf1Q9H5F2 150 aa9□□□□□ -0.97
USP3-218ENST00000560202 PARP11Q9NR21 331 aa9□□□□□ -0.97
USP3-218ENST00000560202 PRNDQ9UKY0 176 aa9□□□□□ -0.97
USP3-218ENST00000560202 FOXA2Q9Y261 457 aaPredicted RBP9□□□□□ -0.97
USP3-218ENST00000560202 WNK2Q9Y3S1 2297 aa9□□□□□ -0.97
USP3-218ENST00000560202 CR1P17927 2039 aa9□□□□□ -0.97
USP3-218ENST00000560202 AKAP9Q99996 3911 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 ZNF705EA8MWA4 302 aaPredicted RBP8.99□□□□□ -0.97
USP3-218ENST00000560202 MED6O75586 246 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 IFNA17P01571 189 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 CRYGBP07316 175 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 HKR1P10072 659 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 F2RL1P55085 397 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 VAMP2P63027 116 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 DEFA6Q01524 100 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 FABP9Q0Z7S8 132 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 EBI3Q14213 229 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 HES1Q14469 280 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 RHEBQ15382 184 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 TEX45Q8NA69 505 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 OR52E5Q8NH55 327 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 RAB40CQ96S21 281 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 RBKSQ9H477 322 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 TMEM14BQ9NUH8 114 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 PPP1R14DQ9NXH3 145 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 CACFD1Q9UGQ2 172 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 FAM96BQ9Y3D0 163 aa8.99□□□□□ -0.97
USP3-218ENST00000560202 MSGN1A6NI15 193 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 TMEM50AO95807 157 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 SFTA3P0C7M3 94 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 FAM106CPP0CH98 169 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 IAPPP10997 89 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 P2RY1P47900 373 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 PAX9P55771 341 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 BPIFB3P59826 476 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 SPCS3P61009 180 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 HSPE1P61604 102 aaKnown RBP8.98□□□□□ -0.97
USP3-218ENST00000560202 RPL8P62917 257 aaKnown RBP8.98□□□□□ -0.97
USP3-218ENST00000560202 PDLIM3Q53GG5 364 aaPredicted RBP8.98□□□□□ -0.97
USP3-218ENST00000560202 FBLN7Q53RD9 439 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 FAM120AOSQ5T036 256 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 THNSL2Q86YJ6 484 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 ZFP82Q8N141 532 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 LILRB2Q8N423 598 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 AQP10Q96PS8 301 aa8.98□□□□□ -0.97
USP3-218ENST00000560202 MEGF9Q9H1U4 602 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms