RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SNAPC5O75971 98 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 NXPH3O95157 252 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 IGF1P05019 195 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 PPIFP30405 207 aaKnown RBP7.37□□□□□ -1.23
HERC1-206ENST00000559996 SPCS3P61009 180 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 POLR2GP62487 172 aaKnown RBP eCLIP7.37□□□□□ -1.23
HERC1-206ENST00000559996 PRCDQ00LT1 54 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 WT1-ASQ06250 92 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 TNFRSF9Q07011 255 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 RAB32Q13637 225 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 TNXAQ16473 311 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 SPINK9Q5DT21 86 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 RBMS3Q6XE24 437 aaKnown RBP7.37□□□□□ -1.23
HERC1-206ENST00000559996 PRIMA1Q86XR5 153 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 OR1L8Q8NGR8 309 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 OR5B3Q8NH48 314 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 SGMS2Q8NHU3 365 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 SRSF12Q8WXF0 261 aaKnown RBP7.37□□□□□ -1.23
HERC1-206ENST00000559996 FAM103A1Q9BTL3 118 aaKnown RBP7.37□□□□□ -1.23
HERC1-206ENST00000559996 RBKSQ9H477 322 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 RANGRFQ9HD47 186 aaPredicted RBP7.37□□□□□ -1.23
HERC1-206ENST00000559996 SERTAD4Q9NUC0 356 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 FKBP11Q9NYL4 201 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 GSKIPQ9P0R6 139 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 KLK9Q9UKQ9 250 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 DMRT1Q9Y5R6 373 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 NF1P21359 2839 aa7.37□□□□□ -1.23
HERC1-206ENST00000559996 BTBD17A6NE02 478 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 FAM90A26D6RGX4 464 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 G3V318 75 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 TCF21O43680 179 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 SOX15O60248 233 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 GIPP09681 153 aaPredicted RBP7.36□□□□□ -1.23
HERC1-206ENST00000559996 LYL1P12980 280 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 AREGP15514 252 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 CD33P20138 364 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 NKX2-1P43699 371 aaPredicted RBP7.36□□□□□ -1.23
HERC1-206ENST00000559996 RPL27AP46776 148 aaKnown RBP7.36□□□□□ -1.23
HERC1-206ENST00000559996 MFAP2P55001 183 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 CFHR3Q02985 330 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 PLGLAQ15195 96 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 BSXQ3C1V8 233 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 TMEM95Q3KNT9 176 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 PVRIGQ6DKI7 326 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 OR1S1Q8NH92 325 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 RNASE11Q8TAA1 199 aaKnown RBP7.36□□□□□ -1.23
HERC1-206ENST00000559996 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
HERC1-206ENST00000559996 PPP1R1CQ8WVI7 109 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 NOL4LQ96MY1 436 aaPredicted RBP7.36□□□□□ -1.23
HERC1-206ENST00000559996 SPIN2AQ99865 258 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 SPIN2BQ9BPZ2 258 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 MAGT1Q9H0U3 335 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 LINC00527Q9UJ94 153 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 ZNF580Q9UK33 172 aa7.36□□□□□ -1.23
HERC1-206ENST00000559996 NIPBLQ6KC79 2804 aaeCLIP7.35□□□□□ -1.23
HERC1-206ENST00000559996 PMS2P5A8MQ11 134 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 SMLR1H3BR10 107 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 TRIM77I1YAP6 450 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 SYNGR2O43760 224 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 RBMXL2O75526 392 aaKnown RBP7.35□□□□□ -1.23
HERC1-206ENST00000559996 MPC2O95563 127 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 CRYGCP07315 174 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 CTRB1P17538 263 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 PSMB6P28072 239 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 RPL15P61313 204 aaKnown RBP7.35□□□□□ -1.23
HERC1-206ENST00000559996 GNB1P62873 340 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 CYCSP99999 105 aaKnown RBP7.35□□□□□ -1.23
HERC1-206ENST00000559996 CD83Q01151 205 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 AKIRIN2Q53H80 203 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 ARSJQ5FYB0 599 aaPredicted RBP7.35□□□□□ -1.23
HERC1-206ENST00000559996 CTRB2Q6GPI1 263 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 TTC9CQ8N5M4 171 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 OR2C3Q8N628 320 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 LFNGQ8NES3 379 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 OR11H4Q8NGC9 324 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 ARPC1AQ92747 370 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 PRSS22Q9GZN4 317 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 COMMD5Q9GZQ3 224 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 WNT10AQ9GZT5 417 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 OR5AC2Q9NZP5 309 aa7.35□□□□□ -1.23
HERC1-206ENST00000559996 DEDDO75618 318 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 IFNA17P01571 189 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 APELAP0DMC3 54 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 RNASE2P10153 161 aaKnown RBP7.34□□□□□ -1.23
HERC1-206ENST00000559996 RAP2BP61225 183 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 KIAA0141Q14154 515 aaPredicted RBP7.34□□□□□ -1.23
HERC1-206ENST00000559996 C9orf152Q5JTZ5 239 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 THOC7Q6I9Y2 204 aaKnown RBP7.34□□□□□ -1.23
HERC1-206ENST00000559996 SLC35E3Q7Z769 313 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 LURAP1LQ8IV03 231 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 STPG2Q8N412 459 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 LINC01006Q8NI28 216 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 GRPEL2Q8TAA5 225 aa7.34□□□□□ -1.23
HERC1-206ENST00000559996 DTD1Q8TEA8 209 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms