RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SIGLEC9Q9Y336 463 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 PLXNB1O43157 2135 aa4.13□□□□□ -1.75
SPG11-220ENST00000559933 IGHV7-81A0A0B4J1V7 117 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 HMX3A6NHT5 357 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 C15orf61A6NNL5 157 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 H3BP45 60 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 BOLA2-SMG1P6H3BVE0 249 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 UPK2O00526 184 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 ST8SIA3O43173 380 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RBFOX2O43251 390 aaKnown RBP eCLIP4.12□□□□□ -1.75
SPG11-220ENST00000559933 SSSCA1O60232 199 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RBMXL2O75526 392 aaKnown RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 CCNKO75909 580 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 OR2A4O95047 310 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 NDUFA3O95167 84 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 TMEM50AO95807 157 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 SLPIP03973 132 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 AMY1AP04745 511 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 FAM106CPP0CH98 169 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RRASP10301 218 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 HNF1AP20823 631 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 VDAC1P21796 283 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 BRS3P32247 399 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 MC5RP33032 325 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 NKX2-5P52952 324 aaPredicted RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 POLR2GP62487 172 aaKnown RBP eCLIP4.12□□□□□ -1.75
SPG11-220ENST00000559933 BLCAPP62952 87 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 SRPXP78539 464 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RAB32Q13637 225 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 FHL2Q14192 279 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 EBI3Q14213 229 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 SMCO1Q147U7 214 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 TNXAQ16473 311 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 PRSS8Q16651 343 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 C5orf64Q2M2E5 130 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 VMA21Q3ZAQ7 101 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 DHRS7BQ6IAN0 325 aaPredicted RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 GSG1LQ6UXU4 331 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 Q6ZSN1 163 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 FAM71E2Q8N5Q1 922 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 C5orf56Q8N8D9 126 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 OR10W1Q8NGF6 305 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 GRPEL2Q8TAA5 225 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 OSR1Q8TAX0 266 aaPredicted RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 IL22RA2Q969J5 263 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 ZNF503Q96F45 646 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RBM14Q96PK6 669 aaKnown RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 OR2A7Q96R45 310 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 NEURL2Q9BR09 285 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 HINT2Q9BX68 163 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 ZNF436Q9C0F3 470 aaPredicted RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 RBKSQ9H477 322 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RAB18Q9NP72 206 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 OR5AC2Q9NZP5 309 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 RCL1Q9Y2P8 373 aaKnown RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 MOB4Q9Y3A3 225 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 LSM5Q9Y4Y9 91 aaKnown RBP4.12□□□□□ -1.75
SPG11-220ENST00000559933 MMP24Q9Y5R2 645 aa4.12□□□□□ -1.75
SPG11-220ENST00000559933 TNCP24821 2201 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TEX50A0A1B0GTY4 177 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TEX22C9J3V5 150 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 H0YIZ8 118 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 K7EPK0 472 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 ATP6V0E1O15342 81 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 GPR137BO60478 399 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 PITX3O75364 302 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 B3GALNT1O75752 331 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 HRASP01112 189 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 IFNA21P01568 189 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 MBPP02686 304 aaPredicted RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 PRH1P02810 166 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 IL6RP08887 468 aaPredicted RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 EGR2P11161 476 aaPredicted RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 AREGP15514 252 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 HLA-GP17693 338 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 HOXA1P49639 335 aaPredicted RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 DYNLT3P51808 116 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 ARHGDIBP52566 201 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 RPL8P62917 257 aaKnown RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 TMEM267Q0VDI3 215 aaPredicted RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 IL15RAQ13261 267 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 POU2AF1Q16633 256 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 ASPHD1Q5U4P2 390 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 THOC7Q6I9Y2 204 aaKnown RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 C10orf99Q6UWK7 81 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 AKAP14Q86UN6 197 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 LILRB2Q8N423 598 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TCTEX1D1Q8N7M0 179 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 NPBQ8NG41 125 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 OR4A16Q8NH70 328 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TMEM167AQ8TBQ9 72 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 CD300LFQ8TDQ1 290 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 ABHD5Q8WTS1 349 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 PPP1R1CQ8WVI7 109 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 LSM10Q969L4 123 aaKnown RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 RRNAD1Q96FB5 475 aaKnown RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 BSCL2Q96G97 398 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms