RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FAM103A1Q9BTL3 118 aaKnown RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 FAAP24Q9BTP7 215 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 PIPOXQ9P0Z9 390 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 UBQLN2Q9UHD9 624 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 IGKV1-6A0A0C4DH72 117 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 A0A0D9SG52 128 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 FOXI3A8MTJ6 420 aaPredicted RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 H0YJW9 148 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 RBMXL2O75526 392 aaKnown RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 IGHV3-11P01762 117 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 IGKV1-16P04430 117 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 HSPB1P04792 205 aaKnown RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 IFNA6P05013 189 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 FCER2P06734 321 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 OR4E1P0C645 316 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 ZNF735P0CB33 412 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 SLC25A4P12235 298 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 LYL1P12980 280 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 RPA2P15927 270 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 TAS2R46P59540 309 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 TSPAN5P62079 268 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 RPS27AP62979 156 aaKnown RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 ZNF345Q14585 488 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 PSG5Q15238 335 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 SRSF7Q16629 238 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP3-215ENST00000559771 CDNFQ49AH0 187 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 C4orf46Q504U0 113 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 AKIRIN2Q53H80 203 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 ZFAND6Q6FIF0 208 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 FAM71F2Q6NXP2 309 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 C6orf201Q7Z4U5 140 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 C12orf45Q8N5I9 185 aaPredicted RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 ZNF383Q8NA42 475 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 LFNGQ8NES3 379 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 BEST4Q8NFU0 473 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 OR11H4Q8NGC9 324 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 MITD1Q8WV92 249 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 GALMQ96C23 342 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 RAB3CQ96E17 227 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 ABHD14BQ96IU4 210 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 PHB2Q99623 299 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 HDHD3Q9BSH5 251 aaPredicted RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 TM2D1Q9BX74 207 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 TMEM59Q9BXS4 323 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 IFT46Q9NQC8 304 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 AP5S1Q9NUS5 200 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 OR1A1Q9P1Q5 309 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 KIAA1456Q9P272 454 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 SLC23A1Q9UHI7 598 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 FLVCR2Q9UPI3 526 aa4.42□□□□□ -1.7
USP3-215ENST00000559771 FOXA2Q9Y261 457 aaPredicted RBP4.42□□□□□ -1.7
USP3-215ENST00000559771 TRBV6-6A0A0A6YYG2 114 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 G3V3Q6 166 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 SMLR1H3BR10 107 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 L7N2F9 121 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 ITGB1BP1O14713 200 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 RAB29O14966 203 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 B3GALNT1O75752 331 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 CA2P00918 260 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 IGLV2-23P01705 113 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 PLA2G1BP04054 148 aaKnown RBP4.41□□□□□ -1.7
USP3-215ENST00000559771 CRYGBP07316 175 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 OR8U9P0C7N5 309 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 HIST1H1DP16402 221 aaKnown RBP4.41□□□□□ -1.7
USP3-215ENST00000559771 M6PRP20645 277 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 S100A11P31949 105 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 DEFA5Q01523 94 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 PJVKQ0ZLH3 352 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 PLA2G7Q13093 441 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 DHRS2Q13268 280 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 OR2F1Q13607 317 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 KLF5Q13887 457 aaPredicted RBP4.41□□□□□ -1.7
USP3-215ENST00000559771 OPCMLQ14982 345 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 HAGHQ16775 308 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 TMEM128Q5BJH2 165 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 UNQ5815/PRO19632Q6UWF5 114 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 ZNF562Q6V9R5 426 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 ADAMTSL5Q6ZMM2 481 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 LINC00322Q6ZN03 302 aaPredicted RBP4.41□□□□□ -1.7
USP3-215ENST00000559771 LYG2Q86SG7 212 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 SLC51BQ86UW2 128 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 PPP1R27Q86WC6 154 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 HOGA1Q86XE5 327 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 TCTEX1D1Q8N7M0 179 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 TERB2Q8NHR7 220 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 IL1F10Q8WWZ1 152 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 PHYHIPLQ96FC7 376 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 C5orf30Q96GV9 206 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 CLCC1Q96S66 551 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 SEC22CQ9BRL7 303 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 LPAR5Q9H1C0 372 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 RAB9BQ9NP90 201 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 KCNIP1Q9NZI2 227 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 COMMD9Q9P000 198 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 HSF4Q9ULV5 492 aa4.41□□□□□ -1.7
USP3-215ENST00000559771 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms