RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 FAM223BA6NKX1 122 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 H3BMQ9 156 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 BMPR1BO00238 502 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 RBFOX2O43251 390 aaKnown RBP eCLIP9.18□□□□□ -0.94
TPM1-216ENST00000558910 SNAPC5O75971 98 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 OR2C1O95371 312 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 RAB3DO95716 219 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 EDN2P20800 178 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 IZUMO4Q1ZYL8 232 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 ZNF585BQ52M93 769 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 SLC25A24Q6NUK1 477 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 FAM223AQ8IWN6 122 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 SLC38A6Q8IZM9 456 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 OR9G4Q8NGQ1 327 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 OR6Q1Q8NGQ2 317 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 OR4A5Q8NH83 315 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 DYNC2LI1Q8TCX1 351 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 MRGPRFQ96AM1 343 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 AIFM2Q9BRQ8 373 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 PLEKHA2Q9HB19 425 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 ZNF257Q9Y2Q1 563 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 OR51B2Q9Y5P1 312 aa9.18□□□□□ -0.94
TPM1-216ENST00000558910 ZNF320A2RRD8 509 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 MFSD2BA6NFX1 497 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 NPIPB5A8MRT5 1133 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 TRAPPC2P0DI81 140 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 TRAPPC2BP0DI82 140 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 GP9P14770 177 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 INSL3P51460 131 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 TMBIM6P55061 237 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
TPM1-216ENST00000558910 TATDN3Q17R31 274 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 SP6Q3SY56 376 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 STEAP1BQ6NZ63 245 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 LPCAT3Q6P1A2 487 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 NECAP1Q8NC96 275 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 MARCH1Q8TCQ1 289 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 QTRT1Q9BXR0 403 aaKnown RBP9.17□□□□□ -0.94
TPM1-216ENST00000558910 COMMD9Q9P000 198 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
TPM1-216ENST00000558910 COL7A1Q02388 2944 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 TRBV9A0A0B4J1U6 114 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 DBX1A6NMT0 343 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 DHFRP00374 187 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 SERPINE2P07093 398 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 CTRB1P17538 263 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 GPR183P32249 361 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 ARL3P36405 182 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 PIGPP57054 158 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 TAS2R19P59542 299 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 TRIM16LQ309B1 348 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 VAX1Q5SQQ9 334 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 CTRB2Q6GPI1 263 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 H2BFWTQ7Z2G1 175 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 UBAC2Q8NBM4 344 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 OR1L8Q8NGR8 309 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 OR4A16Q8NH70 328 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 MCFD2Q8NI22 146 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 CCDC59Q9P031 241 aaKnown RBP9.16□□□□□ -0.94
TPM1-216ENST00000558910 COPZ2Q9P299 210 aa9.16□□□□□ -0.94
TPM1-216ENST00000558910 SORL1Q92673 2214 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.15□□□□□ -0.94
TPM1-216ENST00000558910 IGLC7A0M8Q6 106 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 GABARAPH6UMI1 98 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 IGKV1-39P01597 117 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 IGKV1D-39P04432 117 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 CSN3P07498 182 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 TMEM229BQ8NBD8 167 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 OR13C8Q8NGS7 320 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 RNASE11Q8TAA1 199 aaKnown RBP9.15□□□□□ -0.94
TPM1-216ENST00000558910 DYNLRB2Q8TF09 96 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 CCDC140Q96MF4 163 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 B9D2Q9BPU9 175 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 MCUBQ9NWR8 336 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
TPM1-216ENST00000558910 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 CEPT1Q9Y6K0 416 aa9.15□□□□□ -0.94
TPM1-216ENST00000558910 IGLV11-55A0A075B6I3 123 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 IGHV3OR16-8A0A075B7F1 116 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 FABP12A6NFH5 140 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 DISC1C4P0D8 188 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 GGCTO75223 188 aaKnown RBP9.14□□□□□ -0.95
TPM1-216ENST00000558910 IGHV3-48P01763 117 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 CLEC3BP05452 202 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 CRYGCP07315 174 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 AKR1C2P52895 323 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 WT1-ASQ06250 92 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 POU2AF1Q16633 256 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 IL34Q6ZMJ4 242 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 C15orf40Q8WUR7 153 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 TP53RKQ96S44 253 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
TPM1-216ENST00000558910 C3orf85A0A1B0GTC6 90 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 OR2T8A6NH00 312 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 BRI3O95415 125 aa9.13□□□□□ -0.95
TPM1-216ENST00000558910 IGLV1-51P01701 117 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms