RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 P2RY1P47900 373 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 RPP30P78346 268 aaKnown RBP13.39□□□□□ -0.27
SNX1-203ENST00000558040 CX3CL1P78423 397 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 C10orf55Q5SWW7 151 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 HSD17B13Q7Z5P4 300 aaPredicted RBP13.39□□□□□ -0.27
SNX1-203ENST00000558040 INO80EQ8NBZ0 244 aaPredicted RBP13.39□□□□□ -0.27
SNX1-203ENST00000558040 ARPC1AQ92747 370 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 ZANQ9Y493 2812 aa13.39□□□□□ -0.27
SNX1-203ENST00000558040 OTOGQ6ZRI0 2925 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 INS-IGF2F8WCM5 200 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 BOLA2-SMG1P6H3BVE0 249 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 TSC22D2O75157 780 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 VDAC2P45880 294 aaPredicted RBP13.38□□□□□ -0.27
SNX1-203ENST00000558040 CAV2P51636 162 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 ERHP84090 104 aaKnown RBP13.38□□□□□ -0.27
SNX1-203ENST00000558040 Q71RC1 249 aaPredicted RBP13.38□□□□□ -0.27
SNX1-203ENST00000558040 OR11H4Q8NGC9 324 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 ZNF418Q8TF45 676 aaPredicted RBP13.38□□□□□ -0.27
SNX1-203ENST00000558040 ABHD5Q8WTS1 349 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 SLC25A31Q9H0C2 315 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 LYRM2Q9NU23 88 aaPredicted RBP13.38□□□□□ -0.27
SNX1-203ENST00000558040 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
SNX1-203ENST00000558040 ACANP16112 2415 aa13.38□□□□□ -0.27
SNX1-203ENST00000558040 TEX15Q9BXT5 2789 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 NAV3Q8IVL0 2385 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 IGHV7-81A0A0B4J1V7 117 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 INAFM1C9JVW0 142 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 ARPC5O15511 151 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 EIF2B2P49770 351 aaKnown RBP13.37□□□□□ -0.27
SNX1-203ENST00000558040 SSBP2P81877 361 aaPredicted RBP13.37□□□□□ -0.27
SNX1-203ENST00000558040 OR2C3Q8N628 320 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 ZC4H2Q9NQZ6 224 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 TNFSF18Q9UNG2 199 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 STRAPQ9Y3F4 350 aaKnown RBP13.37□□□□□ -0.27
SNX1-203ENST00000558040 U3KQ87 197 aa13.37□□□□□ -0.27
SNX1-203ENST00000558040 MSGN1A6NI15 193 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 CGB1A6NKQ9 187 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 KCNAB3O43448 404 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 SCAF4O95104 1147 aaKnown RBP13.36□□□□□ -0.27
SNX1-203ENST00000558040 TMEM50AO95807 157 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 AMY1AP04745 511 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 SNCAP37840 140 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 HTR2BP41595 481 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 PAX9P55771 341 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 ATP5IP56385 69 aaPredicted RBP13.36□□□□□ -0.27
SNX1-203ENST00000558040 SPANXN5Q5MJ07 72 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 OR10W1Q8NGF6 305 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 AQP10Q96PS8 301 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 MFFQ9GZY8 342 aa13.36□□□□□ -0.27
SNX1-203ENST00000558040 IGLC7A0M8Q6 106 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 DNAJC9-AS1A6NH13 148 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 TEX22C9J3V5 150 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 E7EUB6 86 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 H3BP45 60 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 IFNA10P01566 189 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 FAM157CP0CG43 387 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 OR13C7P0DN81 318 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 RPL12P30050 165 aaKnown RBP13.35□□□□□ -0.27
SNX1-203ENST00000558040 SUB1P53999 127 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNX1-203ENST00000558040 OR2F1Q13607 317 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 ZNF345Q14585 488 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 ACOT7LQ6ZUV0 252 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 STX12Q86Y82 276 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 SLC24A4Q8NFF2 622 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 JMJD8Q96S16 334 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 HSPB9Q9BQS6 159 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 NPFFR1Q9GZQ6 430 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 PARP11Q9NR21 331 aa13.35□□□□□ -0.27
SNX1-203ENST00000558040 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
SNX1-203ENST00000558040 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 A0A1B0GW64 132 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 FAM24AA6NFZ4 105 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 CLDN34H7C241 214 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 HKR1P10072 659 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 NPY1RP25929 384 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 RAB11AP62491 216 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 NDPQ00604 133 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 WT1-ASQ06250 92 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 BAXQ07812 192 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 SGMS2Q8NHU3 365 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
SNX1-203ENST00000558040 TLN2Q9Y4G6 2542 aa13.34□□□□□ -0.27
SNX1-203ENST00000558040 A0A0D9SG52 128 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 RNF222A6NCQ9 220 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 SH2D7A6NKC9 451 aaPredicted RBP13.33□□□□□ -0.28
SNX1-203ENST00000558040 ATP6V0E1O15342 81 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 CRLF1O75462 422 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 IGHG2P01859 326 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 OR8U8P0C7N1 319 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 C4BPBP20851 252 aa13.33□□□□□ -0.28
SNX1-203ENST00000558040 NKX2-5P52952 324 aaPredicted RBP13.33□□□□□ -0.28
SNX1-203ENST00000558040 AP2S1P53680 142 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms