RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 RTL8CO15255 209 aa13.35□□□□□ -0.27
ABCD4-228ENST00000557588 RBFOX2O43251 390 aaKnown RBP eCLIP13.35□□□□□ -0.27
ABCD4-228ENST00000557588 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
ABCD4-228ENST00000557588 TMEM187Q14656 261 aa13.35□□□□□ -0.27
ABCD4-228ENST00000557588 POU2AF1Q16633 256 aa13.35□□□□□ -0.27
ABCD4-228ENST00000557588 THOC7Q6I9Y2 204 aaKnown RBP13.35□□□□□ -0.27
ABCD4-228ENST00000557588 GPHA2Q96T91 129 aa13.35□□□□□ -0.27
ABCD4-228ENST00000557588 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
ABCD4-228ENST00000557588 KRTAP4-5Q9BYR2 181 aa13.35□□□□□ -0.27
ABCD4-228ENST00000557588 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
ABCD4-228ENST00000557588 IGHV4-4A0A075B6R2 117 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 METTL21EPA6NDL7 271 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 UPK2O00526 184 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 MRPS14O60783 128 aaKnown RBP13.34□□□□□ -0.27
ABCD4-228ENST00000557588 TAS2R31P59538 309 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 FABP5Q01469 135 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 MSMO1Q15800 293 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
ABCD4-228ENST00000557588 OR10W1Q8NGF6 305 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 ZNF414Q96IQ9 312 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 DCSTAMPQ9H295 470 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 C21orf62Q9NYP8 219 aa13.34□□□□□ -0.27
ABCD4-228ENST00000557588 IGHV7-4-1A0A0J9YVY3 117 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 IFITM5A6NNB3 132 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 C15orf61A6NNL5 157 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 CHEK1O14757 476 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 TFPI2P48307 235 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 OR10A3P58181 314 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 WT1-ASQ06250 92 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 HACD4Q5VWC8 232 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 NR2C2APQ86WQ0 139 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 SPAG16Q8N0X2 631 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
ABCD4-228ENST00000557588 TRAV10A0A0B4J240 114 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 SERPINE2P07093 398 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 MLLT11Q13015 90 aaPredicted RBP13.32□□□□□ -0.28
ABCD4-228ENST00000557588 FAM90A2PQ658T7 463 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 Q6ZTC4 211 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 TMEM116Q8NCL8 245 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 SCARB1Q8WTV0 552 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 RNF126Q9BV68 326 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 TMEM140Q9NV12 185 aa13.32□□□□□ -0.28
ABCD4-228ENST00000557588 F11RQ9Y624 299 aaKnown RBP13.32□□□□□ -0.28
ABCD4-228ENST00000557588 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 K7EIM0 57 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 PDCD5O14737 125 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 TNFSF12O43508 249 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 AMBPP02760 352 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 OR13C7P0DN81 318 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 NQO2P16083 231 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 PVRIGQ6DKI7 326 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 SLC25A24Q6NUK1 477 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 OR10C1Q96KK4 312 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 ACOT13Q9NPJ3 140 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 ANXA10Q9UJ72 324 aa13.31□□□□□ -0.28
ABCD4-228ENST00000557588 IGHV3-21A0A0B4J1V1 117 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 TRAV1-2A0A0B4J238 106 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 HPRT1P00492 218 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
ABCD4-228ENST00000557588 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
ABCD4-228ENST00000557588 CDNFQ49AH0 187 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 UBAC2Q8NBM4 344 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 NUDCD2Q8WVJ2 157 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 CMTM3Q96MX0 182 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 ATG5Q9H1Y0 275 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 CCL28Q9NRJ3 127 aa13.3□□□□□ -0.28
ABCD4-228ENST00000557588 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 CTSGP08311 255 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 TRAPPC2P0DI81 140 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 TRAPPC2BP0DI82 140 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 MIFP14174 115 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 RELQ04864 619 aaPredicted RBP13.29□□□□□ -0.28
ABCD4-228ENST00000557588 Q56UQ5 140 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 POM121L12Q8N7R1 296 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 ZBTB34Q8NCN2 500 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 OR13F1Q8NGS4 319 aa13.29□□□□□ -0.28
ABCD4-228ENST00000557588 IGHV3-49A0A0A0MS15 119 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 TMEM235A6NFC5 223 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 SULT1C2O00338 296 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 DFFBO76075 338 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 P0DMU3 169 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 CATR1Q13166 79 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 ZNF773Q6PK81 442 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 GBGT1Q8N5D6 347 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 SECTM1Q8WVN6 248 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 LSM10Q969L4 123 aaKnown RBP13.28□□□□□ -0.28
ABCD4-228ENST00000557588 DGCR14Q96DF8 476 aaKnown RBP13.28□□□□□ -0.28
ABCD4-228ENST00000557588 PLEKHA2Q9HB19 425 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 SCN3BQ9NY72 215 aa13.28□□□□□ -0.28
ABCD4-228ENST00000557588 TEX50A0A1B0GTY4 177 aa13.27□□□□□ -0.29
ABCD4-228ENST00000557588 ZNF705EA8MWA4 302 aaPredicted RBP13.27□□□□□ -0.29
ABCD4-228ENST00000557588 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms