RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 TMEM140Q9NV12 185 aa12.65□□□□□ -0.38
NEDD1-210ENST00000557400 TXNL4BQ9NX01 149 aaKnown RBP12.65□□□□□ -0.38
NEDD1-210ENST00000557400 S1PR2O95136 353 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 OR13C7P0DN81 318 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
NEDD1-210ENST00000557400 SFXN4Q6P4A7 337 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 SPSB3Q6PJ21 355 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 HSD17B13Q7Z5P4 300 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-210ENST00000557400 HOGA1Q86XE5 327 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 GVQW1Q8N7I0 195 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 OR51H1Q8NH63 302 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 CD300LFQ8TDQ1 290 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-210ENST00000557400 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 CNBD2Q96M20 576 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 ATP6V0BQ99437 205 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 PLEKHA2Q9HB19 425 aa12.64□□□□□ -0.39
NEDD1-210ENST00000557400 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
NEDD1-210ENST00000557400 NDUFA4O00483 81 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 SERPINE2P07093 398 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 TRAPPC2P0DI81 140 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 TRAPPC2BP0DI82 140 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 HSPA13P48723 471 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 FXYD4P59646 89 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 WT1-ASQ06250 92 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 SLC25A24Q6NUK1 477 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 C20orf24Q9BUV8 137 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 COMMD9Q9P000 198 aa12.63□□□□□ -0.39
NEDD1-210ENST00000557400 FRAS1Q86XX4 4008 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 TRAV18A0A075B6X5 111 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 K7EMT4 169 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 DEDDO75618 318 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 AADACL3Q5VUY0 350 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 UBE2UQ5VVX9 321 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 LGALS9CQ6DKI2 356 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 ZNF818PQ6ZRF7 136 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 OR1L8Q8NGR8 309 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 OR5B3Q8NH48 314 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 CHRDL1Q9BU40 450 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 C6orf62Q9GZU0 229 aaPredicted RBP12.62□□□□□ -0.39
NEDD1-210ENST00000557400 VCX3BQ9H321 246 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 C21orf62Q9NYP8 219 aa12.62□□□□□ -0.39
NEDD1-210ENST00000557400 IGHV3OR16-8A0A075B7F1 116 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 TEX50A0A1B0GTY4 177 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 MRPS14O60783 128 aaKnown RBP12.61□□□□□ -0.39
NEDD1-210ENST00000557400 CTSDP07339 412 aaPredicted RBP12.61□□□□□ -0.39
NEDD1-210ENST00000557400 PSMB9P28065 219 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 FCGR2BP31994 310 aaPredicted RBP12.61□□□□□ -0.39
NEDD1-210ENST00000557400 SCAND1P57086 179 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 ERVK-16P61578 105 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 IZUMO2Q6UXV1 221 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 TMEM17Q86X19 198 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 GIMAP1Q8WWP7 306 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 SLC25A38Q96DW6 304 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
NEDD1-210ENST00000557400 F11RQ9Y624 299 aaKnown RBP12.61□□□□□ -0.39
NEDD1-210ENST00000557400 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 IGHV3-21A0A0B4J1V1 117 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 A6NJ64 397 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 C15orf62A8K5M9 175 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 F8W735 103 aaPredicted RBP12.6□□□□□ -0.39
NEDD1-210ENST00000557400 ZNF207O43670 478 aaKnown RBP12.6□□□□□ -0.39
NEDD1-210ENST00000557400 FCER2P06734 321 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 ADMP35318 185 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 MFAP2P55001 183 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 GABARAPL2P60520 117 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 UBAC2Q8NBM4 344 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 SCARB1Q8WTV0 552 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 BORCS5Q969J3 196 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
NEDD1-210ENST00000557400 HINT2Q9BX68 163 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 NDUFA4L2Q9NRX3 87 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 SSR3Q9UNL2 185 aa12.6□□□□□ -0.39
NEDD1-210ENST00000557400 K7EIM0 57 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 SDC2P34741 201 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 HERV-K104P61576 105 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 Q56UQ5 140 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 APRG1Q8IVJ8 170 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 OR5AP2Q8NGF4 316 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 OR5H6Q8NGV6 325 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 GATAD1Q8WUU5 269 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 AUNIPQ9H7T9 357 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 SMPXQ9UHP9 88 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 KMT2AQ03164 3969 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 HERC2O95714 4834 aa12.59□□□□□ -0.39
NEDD1-210ENST00000557400 MPTX1A8MV57 137 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 GNRHRP30968 328 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 CBX5P45973 191 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 FCGR1BQ92637 280 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 RNF2Q99496 336 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 MFFQ9GZY8 342 aa12.58□□□□□ -0.4
NEDD1-210ENST00000557400 SNAPC5O75971 98 aa12.57□□□□□ -0.4
NEDD1-210ENST00000557400 RLN1P04808 185 aa12.57□□□□□ -0.4
NEDD1-210ENST00000557400 CLEC2LP0C7M8 214 aa12.57□□□□□ -0.4
NEDD1-210ENST00000557400 F2RP25116 425 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms