RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 EDN2P20800 178 aa6.44□□□□□ -1.38
VRK1-206ENST00000557222 RPL30P62888 115 aaKnown RBP6.44□□□□□ -1.38
VRK1-206ENST00000557222 RPL8P62917 257 aaKnown RBP6.44□□□□□ -1.38
VRK1-206ENST00000557222 CDNFQ49AH0 187 aa6.44□□□□□ -1.38
VRK1-206ENST00000557222 HACD4Q5VWC8 232 aa6.44□□□□□ -1.38
VRK1-206ENST00000557222 THOC7Q6I9Y2 204 aaKnown RBP6.44□□□□□ -1.38
VRK1-206ENST00000557222 ZBTB34Q8NCN2 500 aa6.44□□□□□ -1.38
VRK1-206ENST00000557222 OR1L6Q8NGR2 347 aa6.44□□□□□ -1.38
VRK1-206ENST00000557222 CACNG8Q8WXS5 425 aa6.44□□□□□ -1.38
VRK1-206ENST00000557222 ZNF436Q9C0F3 470 aaPredicted RBP6.44□□□□□ -1.38
VRK1-206ENST00000557222 A0A075B6Q4 140 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 A0A0J9YWU9 116 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 A0A1B0GW64 132 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 TRDV1A0A1B0GX56 115 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 TSPAN4O14817 238 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 SCAF4O95104 1147 aaKnown RBP6.43□□□□□ -1.38
VRK1-206ENST00000557222 AREGP15514 252 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 HLA-GP17693 338 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 RAB3BP20337 219 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 NFYAP23511 347 aaPredicted RBP6.43□□□□□ -1.38
VRK1-206ENST00000557222 MYL9P24844 172 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 PTBP1P26599 531 aaKnown RBP eCLIP6.43□□□□□ -1.383e-15■■■□□ 14.7
VRK1-206ENST00000557222 BRWD1-AS2P59051 145 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 LAMTOR1Q6IAA8 161 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 BTNL8Q6UX41 500 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 Q6ZSN1 163 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 LYG2Q86SG7 212 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 VKORC1L1Q8N0U8 176 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 ZNF502Q8TBZ5 544 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 VN1R17PQ8TDU5 208 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 TCTEX1D2Q8WW35 142 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 RNF183Q96D59 192 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 CCDC90BQ9GZT6 254 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 ATG5Q9H1Y0 275 aa6.43□□□□□ -1.38
VRK1-206ENST00000557222 IGKV1D-13A0A0B4J2D9 117 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 IGHV3-23P01764 117 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 IGKV1-13P0DP09 117 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 CRHBPP24387 322 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
VRK1-206ENST00000557222 OR10A3P58181 314 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 TAS2R31P59538 309 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 OR2B8PP59922 312 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 TBCEQ15813 527 aaPredicted RBP6.42□□□□□ -1.38
VRK1-206ENST00000557222 POU2AF1Q16633 256 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 ZNF585BQ52M93 769 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 LGALS9CQ6DKI2 356 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 SPSB3Q6PJ21 355 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 PLET1Q6UQ28 207 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 UNQ9165/PRO28630Q6UXU0 137 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 ZNF367Q7RTV3 350 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 HSD17B13Q7Z5P4 300 aaPredicted RBP6.42□□□□□ -1.38
VRK1-206ENST00000557222 CADM3Q8N126 398 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 NDUFB11Q9NX14 153 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 ANXA10Q9UJ72 324 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 SPATA2Q9UM82 520 aa6.42□□□□□ -1.38
VRK1-206ENST00000557222 RYR1P21817 5038 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 IGLC7A0M8Q6 106 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 MFSD2BA6NFX1 497 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 OR4C46A6NHA9 309 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 J3QRK9 145 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 K7EMT4 169 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 HPRT1P00492 218 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 NQO2P16083 231 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 TCTAP57738 103 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 ARPC4P59998 168 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 PMS2P11Q13670 270 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 TIMM50Q3ZCQ8 353 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 OR2B11Q5JQS5 317 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 C19orf35Q6ZS72 473 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 CD300LFQ8TDQ1 290 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 TMEM190Q8WZ59 177 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 GALNT14Q96FL9 552 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 BSCL2Q96G97 398 aaPredicted RBP6.41□□□□□ -1.38
VRK1-206ENST00000557222 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 COMMD5Q9GZQ3 224 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 C6orf62Q9GZU0 229 aaPredicted RBP6.41□□□□□ -1.38
VRK1-206ENST00000557222 DAZ1Q9NQZ3 744 aaKnown RBP6.41□□□□□ -1.38
VRK1-206ENST00000557222 ELF5Q9UKW6 265 aaPredicted RBP6.41□□□□□ -1.38
VRK1-206ENST00000557222 BLOC1S6Q9UL45 172 aa6.41□□□□□ -1.38
VRK1-206ENST00000557222 DNAH17Q9UFH2 4485 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 CGB1A6NKQ9 187 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 NDUFA4O00483 81 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 UPK2O00526 184 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 TGOLN2O43493 480 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 MRPS14O60783 128 aaKnown RBP6.4□□□□□ -1.38
VRK1-206ENST00000557222 FGF9P31371 208 aaPredicted RBP6.4□□□□□ -1.38
VRK1-206ENST00000557222 GPR183P32249 361 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
VRK1-206ENST00000557222 SCAND1P57086 179 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 GNG2P59768 71 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
VRK1-206ENST00000557222 CATR1Q13166 79 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 DEFB135Q30KP9 77 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 SSX9Q7RTT3 188 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 TPRA1Q86W33 373 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 SPAG16Q8N0X2 631 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 GATAD1Q8WUU5 269 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 BORCS5Q969J3 196 aa6.4□□□□□ -1.38
VRK1-206ENST00000557222 QTRT1Q9BXR0 403 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms