RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 HSP90B2PQ58FF3 399 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 ZFP41Q8N8Y5 198 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 SMIM19Q96E16 107 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 OR10C1Q96KK4 312 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 CMSS1Q9BQ75 279 aaKnown RBP8.72□□□□□ -1.01
PSEN1-220ENST00000557037 MRPS7Q9Y2R9 242 aaKnown RBP8.72□□□□□ -1.01
PSEN1-220ENST00000557037 PRELID3BQ9Y3B1 194 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 RFNGQ9Y644 331 aa8.72□□□□□ -1.01
PSEN1-220ENST00000557037 TEX48A0A1B0GUV7 120 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 TCRBV3S1A0A5B6 114 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 K7EQG2 157 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 OGG1O15527 345 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 CD5P06127 495 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 UBBP0CG47 229 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 GNB3P16520 340 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 DAD1P61803 113 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 RELQ04864 619 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-220ENST00000557037 OXA1LQ15070 435 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 TTC32Q5I0X7 151 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 CDPF1Q6NVV7 123 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 ZNF705AQ6ZN79 300 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-220ENST00000557037 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 LRRTM1Q86UE6 522 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 MAFIPQ8WZ33 124 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 RAB40CQ96S21 281 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 NEU1Q99519 415 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 SLC29A1Q99808 456 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 GINS4Q9BRT9 223 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 C1QTNF4Q9BXJ3 329 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 VSIRQ9H7M9 311 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 HRASLSQ9HDD0 168 aa8.71□□□□□ -1.02
PSEN1-220ENST00000557037 TRAV3A0A0B4J244 114 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 ZNF705FA8MVS1 300 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-220ENST00000557037 EREGO14944 169 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 CYB5BO43169 146 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 LALBAP00709 142 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 ZNF705DP0CH99 300 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-220ENST00000557037 ZNF705BP0CI00 300 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-220ENST00000557037 OR13C7P0DN81 318 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 FLOT2Q14254 428 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 AMIGO2Q86SJ2 522 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 CBR4Q8N4T8 237 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 GDPD1Q8N9F7 314 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 OR4S2Q8NH73 311 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 ARHGAP5-AS1Q96IT6 56 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 CABLES2Q9BTV7 478 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 FAT3Q8TDW7 4589 aa8.7□□□□□ -1.02
PSEN1-220ENST00000557037 K7EIM0 57 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 ETV1P50549 477 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 BRWD1-AS2P59051 145 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 USF2Q15853 346 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-220ENST00000557037 YIF1BQ5BJH7 314 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 NKAIN3Q8N8D7 197 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 TCTEX1D2Q8WW35 142 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 GRAMD2BQ96HH9 432 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 DERL3Q96Q80 235 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 PECRQ9BY49 303 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 LPAR5Q9H1C0 372 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 Q9H3A6 140 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 ZNF586Q9NXT0 402 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 YTHDF2Q9Y5A9 579 aaKnown RBP8.69□□□□□ -1.02
PSEN1-220ENST00000557037 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
PSEN1-220ENST00000557037 SMIM9A6NGZ8 99 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 TMEM14DPA8MWL7 114 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 TMEM50BP56557 158 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 FXYD7P58549 80 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 TAS2R43P59537 309 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 NUTF2P61970 127 aaKnown RBP8.68□□□□□ -1.02
PSEN1-220ENST00000557037 QRFPP83859 136 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 CLINT1Q14677 625 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 PSMG4Q5JS54 123 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 H1FOOQ8IZA3 346 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-220ENST00000557037 GPHA2Q96T91 129 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 ATP6V0BQ99437 205 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 BABAM2Q9NXR7 383 aa8.68□□□□□ -1.02
PSEN1-220ENST00000557037 RBMX2Q9Y388 322 aaKnown RBP8.68□□□□□ -1.02
PSEN1-220ENST00000557037 LRP2P98164 4655 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 PNMA8CA0A1B0GUJ8 204 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 F5H768 121 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 HRASP01112 189 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 SERPINE2P07093 398 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 FGF9P31371 208 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-220ENST00000557037 LINC00315P59091 139 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 TIMM50Q3ZCQ8 353 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 TMPRSS11AQ6ZMR5 421 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-220ENST00000557037 PGLYRP3Q96LB9 341 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 UHRF2Q96PU4 802 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 GINS3Q9BRX5 216 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 QTRT1Q9BXR0 403 aaKnown RBP8.67□□□□□ -1.02
PSEN1-220ENST00000557037 COMMD5Q9GZQ3 224 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 HSF4Q9ULV5 492 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 SPATA2Q9UM82 520 aa8.67□□□□□ -1.02
PSEN1-220ENST00000557037 PUS1Q9Y606 427 aaKnown RBP eCLIP8.67□□□□□ -1.02
PSEN1-220ENST00000557037 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
PSEN1-220ENST00000557037 FOXI3A8MTJ6 420 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-220ENST00000557037 IGHV3-48P01763 117 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms