RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 TRAV39A0A0B4J263 110 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 TRAV41A0A0B4J266 112 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 H0Y980 276 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 I3L521 148 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 CA11O75493 328 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 HSPB1P04792 205 aaKnown RBP3.56□□□□□ -1.84
HIF1A-209ENST00000556827 SPNP16150 400 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ZP3P21754 424 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ZBTB25P24278 435 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 RBM11P57052 281 aaKnown RBP3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ACTBP60709 375 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ASAH1Q13510 395 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ATP6AP1Q15904 470 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 TATDN3Q17R31 274 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 MPV17LQ2QL34 196 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 PIGYQ3MUY2 71 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ZNF660Q6AZW8 331 aaPredicted RBP3.56□□□□□ -1.84
HIF1A-209ENST00000556827 KDM4DQ6B0I6 523 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 LYPD6Q86Y78 171 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 FAM71E2Q8N5Q1 922 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 TCTEX1D1Q8N7M0 179 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 OR51A2Q8NGJ7 313 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 OR10K1Q8NGX5 313 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 OR10AC1Q8NH08 325 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 PLPPR1Q8TBJ4 325 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 PELI1Q96FA3 418 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 Q96MT0 163 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 CIB1Q99828 191 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 HSPB9Q9BQS6 159 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 NDUFAF3Q9BU61 184 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 PAXXQ9BUH6 204 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 TMEM138Q9NPI0 162 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 OR2S2Q9NQN1 319 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 PLSCR3Q9NRY6 295 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ZNF355PQ9NSJ1 428 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 ABRACLQ9P1F3 81 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 MBD2Q9UBB5 411 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 LRRC42Q9Y546 428 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 AP4S1Q9Y587 144 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 TENM3Q9P273 2699 aa3.56□□□□□ -1.84
HIF1A-209ENST00000556827 IGHV3-43A0A0B4J1X8 118 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 A0A0G2JLM5 398 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TCRBV3S1A0A5B6 114 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 OR4C45A6NMZ5 311 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 G3V318 75 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 NBR2O15453 112 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 LANCL1O43813 399 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 CDRT1O95170 752 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 HLA-DRB1P01911 266 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 MT-ND4P03905 459 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 LGALS1P09382 135 aaKnown RBP3.55□□□□□ -1.84
HIF1A-209ENST00000556827 IGHV3-43DP0DP04 118 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 SERPINA2P20848 420 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 ZNF93P35789 620 aaPredicted RBP3.55□□□□□ -1.84
HIF1A-209ENST00000556827 ALDH3B2P48448 385 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 SYT6Q5T7P8 510 aaPredicted RBP3.55□□□□□ -1.84
HIF1A-209ENST00000556827 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TMPRSS11AQ6ZMR5 421 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 LHFPL3Q86UP9 236 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 SYS1Q8N2H4 156 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TMEM104Q8NE00 496 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 OR51A4Q8NGJ6 313 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 MYOZ3Q8TDC0 251 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 ARPC1AQ92747 370 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 GALMQ96C23 342 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 MRPS24Q96EL2 167 aaKnown RBP3.55□□□□□ -1.84
HIF1A-209ENST00000556827 CENPNQ96H22 339 aaPredicted RBP3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TM2D3Q9BRN9 247 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TMED9Q9BVK6 235 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TOLLIPQ9H0E2 274 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 IL36GQ9NZH8 169 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 CELA1Q9UNI1 258 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 POMPQ9Y244 141 aa3.55□□□□□ -1.84
HIF1A-209ENST00000556827 TRIM64CA6NLI5 447 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 ZNF736B4DX44 427 aaPredicted RBP3.54□□□□□ -1.84
HIF1A-209ENST00000556827 C12orf77C9JDV5 145 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 C15orf65H3BRN8 121 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 H7C2Y5 167 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 GABRPO00591 440 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 GEMIN2O14893 280 aaKnown RBP3.54□□□□□ -1.84
HIF1A-209ENST00000556827 CIB2O75838 187 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 CNIH1O95406 144 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 HBZP02008 142 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 TRGV3P03979 118 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 GLAP06280 429 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 CT45A10P0DMU9 189 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 FUT3P21217 361 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 BLVRBP30043 206 aaPredicted RBP3.54□□□□□ -1.84
HIF1A-209ENST00000556827 POLR2IP36954 125 aaKnown RBP3.54□□□□□ -1.84
HIF1A-209ENST00000556827 ZNF137PP52743 207 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 TPPP2P59282 170 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 SNRPGP62308 76 aaKnown RBP3.54□□□□□ -1.84
HIF1A-209ENST00000556827 RAB40BQ12829 278 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 MED21Q13503 144 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 RIPK1Q13546 671 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 C5orf64Q2M2E5 130 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 CCDC58Q4VC31 144 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 AKIRIN2Q53H80 203 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 ACTBL2Q562R1 376 aa3.54□□□□□ -1.84
HIF1A-209ENST00000556827 CT45A1Q5HYN5 189 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms