RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 FAM25AB3EWG3 89 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 FAM25CB3EWG5 89 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 FAM25GB3EWG6 89 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 GGCTO75223 188 aaKnown RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 SNAPC5O75971 98 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 FGF2P09038 288 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 F2RP25116 425 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 HLA-DMAP28067 261 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 PSMB6P28072 239 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 GNRHRP30968 328 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 TGFBR1P36897 503 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 NCS1P62166 190 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 EIF4EBP1Q13541 118 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 MRGPRG-AS1Q2M3A8 158 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 C10orf55Q5SWW7 151 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 HSD17B13Q7Z5P4 300 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 Q8N402 240 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 EEF1AKMT3Q96AZ1 226 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 MOB3AQ96BX8 217 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 ASCL2Q99929 193 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 SRSF8Q9BRL6 282 aaKnown RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 FKBP11Q9NYL4 201 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 SIGLEC8Q9NYZ4 499 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 COMMD9Q9P000 198 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 TRBV7-1A0A0A6YYK4 115 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF320A2RRD8 509 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 MARCH11A6NNE9 402 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 GPR31O00270 319 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 PGLYRP1O75594 196 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 RLN1P04808 185 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 CRYGCP07315 174 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 IL6RP08887 468 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 ZNF735P0CB33 412 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 HRH1P35367 487 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 BRWD1-AS2P59051 145 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 THOC7Q6I9Y2 204 aaKnown RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 SNX29P2Q8IUI4 249 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 DYNLRB2Q8TF09 96 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 DGCR14Q96DF8 476 aaKnown RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 TSC22D3Q99576 134 aa5.6□□□□□ -1.51
SCFD1-222ENST00000556768 QTRT1Q9BXR0 403 aaKnown RBP5.6□□□□□ -1.51
SCFD1-222ENST00000556768 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 TEX22C9J3V5 150 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 KRASP01116 189 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 TRBV12-3P01733 135 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 FRMD6-AS1P0C7T7 363 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 TRAPPC2P0DI81 140 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 TRAPPC2BP0DI82 140 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 RCVRNP35243 200 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 DEFA5Q01523 94 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 OR1L8Q8NGR8 309 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 OR2K2Q8NGT1 345 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 GPX8Q8TED1 209 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 TMEM56Q96MV1 263 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 HINT2Q9BX68 163 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 SLC2A8Q9NY64 477 aa5.59□□□□□ -1.51
SCFD1-222ENST00000556768 TRIM64CA6NLI5 447 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 BMPR1BO00238 502 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 UPK2O00526 184 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 RGS5O15539 181 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 RBMXL2O75526 392 aaKnown RBP5.58□□□□□ -1.52
SCFD1-222ENST00000556768 S1PR2O95136 353 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 OR2C1O95371 312 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 SCGB1D1O95968 90 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 CLEC3BP05452 202 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 EIF4EP06730 217 aaKnown RBP5.58□□□□□ -1.52
SCFD1-222ENST00000556768 SERPINE2P07093 398 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 AREGP15514 252 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 ZNF182P17025 639 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-222ENST00000556768 CTRB1P17538 263 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 ARL3P36405 182 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 LPAR6P43657 344 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 OR2B8PP59922 312 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 ZNF45Q02386 682 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 POU2AF1Q16633 256 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 CTRB2Q6GPI1 263 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 CLEC19AQ6UXS0 136 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 GPR141Q7Z602 305 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 GPHB5Q86YW7 130 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 SBSPONQ8IVN8 264 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 SLC38A6Q8IZM9 456 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 OR1L6Q8NGR2 347 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 FCAMRQ8WWV6 532 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 PALMDQ9NP74 551 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 TECRQ9NZ01 308 aaKnown RBP5.58□□□□□ -1.52
SCFD1-222ENST00000556768 PRNDQ9UKY0 176 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 STAB2Q8WWQ8 2551 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 PPP5D1E7EU14 171 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 E7EUB6 86 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 HPGDSO60760 199 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 TPPPO94811 219 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 ATG12O94817 140 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 REG1AP05451 166 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 CSN3P07498 182 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 OR13C7P0DN81 318 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 IGHV4-30-4P0DP06 118 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 PGAM2P15259 253 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 RPA2P15927 270 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 ELK1P19419 428 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms