RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 GAR1Q9NY12 217 aaKnown RBP7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 COMMD9Q9P000 198 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 NSG2Q9Y328 171 aa7.98□□□□□ -1.13
SPTLC2-205ENST00000556607 IGHV3-21A0A0B4J1V1 117 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 TEX50A0A1B0GTY4 177 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 IGLC7A0M8Q6 106 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 FAM25AB3EWG3 89 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 FAM25CB3EWG5 89 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 FAM25GB3EWG6 89 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 GPR31O00270 319 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 EIF4EP06730 217 aaKnown RBP7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 OR13C7P0DN81 318 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 HRH1P35367 487 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 POU2AF1Q16633 256 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 PHLDA2Q53GA4 152 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 TM4SF20Q53R12 229 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 THOC7Q6I9Y2 204 aaKnown RBP7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 LPCAT3Q6P1A2 487 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 SNX29P2Q8IUI4 249 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 TMEM61Q8N0U2 210 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 UBAC2Q8NBM4 344 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 OR1L8Q8NGR8 309 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 FCAMRQ8WWV6 532 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 DGCR14Q96DF8 476 aaKnown RBP7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 EDA2RQ9HAV5 297 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 MLXQ9UH92 298 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 UFC1Q9Y3C8 167 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 OR51B2Q9Y5P1 312 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 RYR3Q15413 4870 aa7.97□□□□□ -1.13
SPTLC2-205ENST00000556607 TMEM213A2RRL7 107 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 RBMY1BA6NDE4 496 aaKnown RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 RBMY1EA6NEQ0 496 aaKnown RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 OR2T8A6NH00 312 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 SERPINE2P07093 398 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 RBMY1DP0C7P1 496 aaKnown RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 PTBP1P26599 531 aaKnown RBP eCLIP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 VBP1P61758 197 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 NCS1P62166 190 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 ANKRD55Q3KP44 614 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 RNASE12Q5GAN4 147 aaKnown RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 UNQ9165/PRO28630Q6UXU0 137 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 HSD17B13Q7Z5P4 300 aaPredicted RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 GDPD1Q8N9F7 314 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 ZNF502Q8TBZ5 544 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 LSM10Q969L4 123 aaKnown RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 SLC25A46Q96AG3 418 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 TMEM56Q96MV1 263 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 SRSF8Q9BRL6 282 aaKnown RBP7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 FUNDC2Q9BWH2 189 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 FXYD6Q9H0Q3 95 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 HIPK2Q9H2X6 1198 aa7.96□□□□□ -1.14
SPTLC2-205ENST00000556607 A8MWP6 167 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 TGOLN2O43493 480 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 NAT1P18440 290 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 WT1-ASQ06250 92 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 Q56UQ5 140 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 TBC1D26Q86UD7 250 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 LYSMD2Q8IV50 215 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 SLC38A6Q8IZM9 456 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 VN1R17PQ8TDU5 208 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 MARC2Q969Z3 335 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 TSC22D3Q99576 134 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 FKBP11Q9NYL4 201 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 MRPL27Q9P0M9 148 aaKnown RBP7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 PRNDQ9UKY0 176 aa7.95□□□□□ -1.14
SPTLC2-205ENST00000556607 IGHV3OR16-8A0A075B7F1 116 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 HPGDSO60760 199 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 APOA1P02647 267 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 FGF2P09038 288 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 PGAM2P15259 253 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 RORCP51449 518 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 KLK9Q2XQG4 91 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 MZT2AQ6P582 158 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 LINC00322Q6ZN03 302 aaPredicted RBP7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 H2BFWTQ7Z2G1 175 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 OR1L6Q8NGR2 347 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 OR4A16Q8NH70 328 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 IL17DQ8TAD2 202 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 MISP3Q96FF7 219 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 BSCL2Q96G97 398 aaPredicted RBP7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 NDUFA4L2Q9NRX3 87 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 C21orf62Q9NYP8 219 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 UBQLN2Q9UHD9 624 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 KLK9Q9UKQ9 250 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 ANAPC10Q9UM13 185 aa7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 F11RQ9Y624 299 aaKnown RBP7.94□□□□□ -1.14
SPTLC2-205ENST00000556607 LOC102724200A0A096LPH7 203 aaPredicted RBP7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 LCE6AA0A183 80 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 M0QYG6 137 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 ZNF207O43670 478 aaKnown RBP7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 ELK1P19419 428 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 RCVRNP35243 200 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 ELLP55199 621 aaPredicted RBP7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 LAMTOR1Q6IAA8 161 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 OR2C3Q8N628 320 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 OR5B3Q8NH48 314 aa7.93□□□□□ -1.14
SPTLC2-205ENST00000556607 GPX8Q8TED1 209 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms