RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 OR1S1Q8NH92 325 aa8.87□□□□□ -0.99
FOXN3-212ENST00000556541 WIPF2Q8TF74 440 aaPredicted RBP8.87□□□□□ -0.99
FOXN3-212ENST00000556541 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
FOXN3-212ENST00000556541 CIB3Q96Q77 187 aaPredicted RBP8.87□□□□□ -0.99
FOXN3-212ENST00000556541 TNFRSF19Q9NS68 423 aa8.87□□□□□ -0.99
FOXN3-212ENST00000556541 SERTAD4Q9NUC0 356 aa8.87□□□□□ -0.99
FOXN3-212ENST00000556541 MGAT4CQ9UBM8 478 aa8.87□□□□□ -0.99
FOXN3-212ENST00000556541 A0A1B0GW64 132 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 C5orf51A6NDU8 294 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 MPTX1A8MV57 137 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 E7EUB6 86 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 GOSR2O14653 212 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
FOXN3-212ENST00000556541 GIPP09681 153 aaPredicted RBP8.86□□□□□ -0.99
FOXN3-212ENST00000556541 PPIFP30405 207 aaKnown RBP8.86□□□□□ -0.99
FOXN3-212ENST00000556541 VDAC2P45880 294 aaPredicted RBP8.86□□□□□ -0.99
FOXN3-212ENST00000556541 H2BFSP57053 126 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 FCN2Q15485 313 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 IZUMO4Q1ZYL8 232 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 BSXQ3C1V8 233 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 Q6ZS46 218 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 OR2C3Q8N628 320 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 RNF152Q8N8N0 203 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 UXS1Q8NBZ7 420 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 OR11H7Q8NGC8 314 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 FAM110DQ8TAY7 271 aaPredicted RBP8.86□□□□□ -0.99
FOXN3-212ENST00000556541 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 PLEKHA3Q9HB20 300 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 NSG2Q9Y328 171 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 FBXO7Q9Y3I1 522 aa8.86□□□□□ -0.99
FOXN3-212ENST00000556541 JMJD1CQ15652 2540 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 TRAV41A0A0B4J266 112 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 CLPSL1A2RUU4 121 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 MSGN1A6NI15 193 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 CCSO14618 274 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 SYNGR2O43760 224 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 SCAF4O95104 1147 aaKnown RBP8.85□□□□□ -0.99
FOXN3-212ENST00000556541 IFNA17P01571 189 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 IGLV1-40P01703 118 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 IGHG4P01861 327 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 CTRB1P17538 263 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 RAP2BP61225 183 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 GNB1P62873 340 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 ERHP84090 104 aaKnown RBP8.85□□□□□ -0.99
FOXN3-212ENST00000556541 FOXL1Q12952 345 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 C10orf55Q5SWW7 151 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 ASPHD1Q5U4P2 390 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 CTRB2Q6GPI1 263 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 NOXA1Q86UR1 476 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 PRIMA1Q86XR5 153 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 LINC01006Q8NI28 216 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 RAB40CQ96S21 281 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 CLCC1Q96S66 551 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 ZNF436Q9C0F3 470 aaPredicted RBP8.85□□□□□ -0.99
FOXN3-212ENST00000556541 PARP11Q9NR21 331 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 WSB1Q9Y6I7 421 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 U3KQ87 197 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 CUBNO60494 3623 aa8.85□□□□□ -0.99
FOXN3-212ENST00000556541 C13orf42A0A1B0GVH6 325 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 LINC01548A6NM66 108 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 CYB5BO43169 146 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 MBPP02686 304 aaPredicted RBP8.84□□□□□ -0.99
FOXN3-212ENST00000556541 ELANEP08246 267 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 PET100P0DJ07 73 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 HIST1H1BP16401 226 aaKnown RBP8.84□□□□□ -0.99
FOXN3-212ENST00000556541 CXCL3P19876 107 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 PSMB6P28072 239 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 HTR2BP41595 481 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 PROK1P58294 105 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 SLC35B1P78383 322 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 WT1-ASQ06250 92 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 FGL1Q08830 312 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 CXorf66Q5JRM2 361 aaPredicted RBP8.84□□□□□ -0.99
FOXN3-212ENST00000556541 C9orf152Q5JTZ5 239 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 UNQ5815/PRO19632Q6UWF5 114 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 OR1P1Q8NH06 330 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 GRPEL2Q8TAA5 225 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 DTD1Q8TEA8 209 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 SMIM8Q96KF7 97 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 ATP6V0BQ99437 205 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 MDFIQ99750 246 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 HIPK2Q9H2X6 1198 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 RBKSQ9H477 322 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 C11orf1Q9H5F2 150 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 ENY2Q9NPA8 101 aa8.84□□□□□ -0.99
FOXN3-212ENST00000556541 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 SH2D7A6NKC9 451 aaPredicted RBP8.83□□□□□ -1
FOXN3-212ENST00000556541 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 FAM25EA8MYX2 175 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 K7EPK0 472 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 CORTO00230 105 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 TSC22D2O75157 780 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 FBXO24O75426 580 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 LYL1P12980 280 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 MYOD1P15172 320 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 HOXA1P49639 335 aaPredicted RBP8.83□□□□□ -1
FOXN3-212ENST00000556541 BCAP31P51572 246 aa8.83□□□□□ -1
FOXN3-212ENST00000556541 SUB1P53999 127 aaKnown RBP eCLIP8.83□□□□□ -1
FOXN3-212ENST00000556541 RPP30P78346 268 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms