RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 DEFB108BQ8NET1 73 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 OR51G1Q8NGK1 321 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 ABHD5Q8WTS1 349 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 FRZBQ92765 325 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 NEUROG1Q92886 237 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 OR5B12Q96R08 314 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 ELOVL1Q9BW60 279 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 MRPL20Q9BYC9 149 aaKnown RBP4.41□□□□□ -1.7
GPHN-213ENST00000556501 OR51M1Q9H341 326 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 CHODLQ9H9P2 273 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 NPVFQ9HCQ7 196 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 NIT2Q9NQR4 276 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 SLC35D1Q9NTN3 355 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 GAR1Q9NY12 217 aaKnown RBP4.41□□□□□ -1.7
GPHN-213ENST00000556501 BET1LQ9NYM9 111 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 TP53TG5Q9Y2B4 290 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 ZNF835Q9Y2P0 537 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 OR51B2Q9Y5P1 312 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 ARL2-SNX15V9GYD0 113 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 AKAP13Q12802 2813 aa4.41□□□□□ -1.7
GPHN-213ENST00000556501 ANKRD11Q6UB99 2663 aaPredicted RBP4.41□□□□□ -1.7
GPHN-213ENST00000556501 TMEM178BH3BS89 294 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 PPP1R2P9O14990 202 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 FCN3O75636 299 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 APOA2P02652 100 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 FABP1P07148 127 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 SOD3P08294 240 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 SAA1P0DJI8 122 aaPredicted RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 NDUFB7P17568 137 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 S100A2P29034 98 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 GCHFRP30047 84 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 GALR1P47211 349 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 UBE2G2P60604 165 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 CCL8P80075 99 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 RAB31Q13636 194 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 EFNB3Q15768 340 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 TMEM177Q53S58 311 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 C2orf83Q53S99 150 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 COA6Q5JTJ3 125 aaKnown RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 GFRALQ6UXV0 394 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 LINC01551Q86U37 167 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 MRPL41Q8IXM3 137 aaKnown RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 CISD2Q8N5K1 135 aaKnown RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 LINC00311Q8N616 119 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 STPG3Q8N7X2 389 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 OR1L8Q8NGR8 309 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 OR5B3Q8NH48 314 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 OR4X1Q8NH49 305 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 OSR1Q8TAX0 266 aaPredicted RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 ZNF596Q8TC21 504 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 SSMEM1Q8WWF3 244 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 C11orf52Q96A22 123 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 BTF3L4Q96K17 158 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 SLC35E1Q96K37 410 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 ZNF714Q96N38 554 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 PLEKHA3Q9HB20 300 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 PATZ1Q9HBE1 687 aaKnown RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 GSN-AS1Q9NRJ2 163 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 FKBP11Q9NYL4 201 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 SLC25A10Q9UBX3 287 aaPredicted RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 SLC45A2Q9UMX9 530 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 YTHDF2Q9Y5A9 579 aaKnown RBP4.4□□□□□ -1.71
GPHN-213ENST00000556501 CFAP54Q96N23 3096 aa4.4□□□□□ -1.71
GPHN-213ENST00000556501 WDFY3Q8IZQ1 3526 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 CHD8Q9HCK8 2581 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PPIAL4EA0A075B759 164 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TEX50A0A1B0GTY4 177 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 SCO2A0A1W2PP80 73 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 SRRM4A7MD48 611 aaKnown RBP4.39□□□□□ -1.71
GPHN-213ENST00000556501 LINC00587B1AMM8 73 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PPP5D1E7EU14 171 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PPIAL4DF5H284 164 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 INS-IGF2F8WCM5 200 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 H0YJW9 148 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 J3QR06 171 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TNFRSF13BO14836 293 aaPredicted RBP4.39□□□□□ -1.71
GPHN-213ENST00000556501 NDUFB4O95168 129 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 MT-CO2P00403 227 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 IGKV1-16P04430 117 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 LINC00869P0C866 280 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PPIAL4FP0DN26 164 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 RNASE2P10153 161 aaKnown RBP4.39□□□□□ -1.71
GPHN-213ENST00000556501 MYOD1P15172 320 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 AREGP15514 252 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 IGFBP2P18065 325 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 ZNF137PP52743 207 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 DLX6P56179 175 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 RPL31P62899 125 aaKnown RBP4.39□□□□□ -1.71
GPHN-213ENST00000556501 LCN2P80188 198 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 ANKRD39Q53RE8 183 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 PYY3Q5JQD4 70 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 ACTL10Q5JWF8 245 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 GFI1BQ5VTD9 330 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 SPATA31B1PQ5VZV4 182 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 CST9LP1Q5W188 147 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TMEM144Q7Z5S9 345 aa4.39□□□□□ -1.71
GPHN-213ENST00000556501 TMEM183AQ8IXX5 376 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms