RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 EIF2B2P49770 351 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 SNRPGP62308 76 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 RHOGP84095 191 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 MRPL28Q13084 256 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 IRF3Q14653 427 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 RPL39P5Q59GN2 51 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 CTRB2Q6GPI1 263 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 RBPMS2Q6ZRY4 209 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 C5orf24Q7Z6I8 188 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 FAM223AQ8IWN6 122 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 TMEM61Q8N0U2 210 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 ACBD7Q8N6N7 88 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 UXS1Q8NBZ7 420 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 ADAD2Q8NCV1 583 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 OR5AK2Q8NH90 309 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 FAM46BQ96A09 425 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 TMEM138Q9NPI0 162 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 IMPAD1Q9NX62 359 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 ABRACLQ9P1F3 81 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 FBXL17Q9UF56 701 aa3.54□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF230Q9UIE0 474 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 EXOSC1Q9Y3B2 195 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 RPL36Q9Y3U8 105 aaKnown RBP3.54□□□□□ -1.84
ATXN3-239ENST00000556315 TRBV9A0A0B4J1U6 114 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 A0A1W2PP11 408 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF320A2RRD8 509 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 RTL8CO15255 209 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 SNAPC5O75971 98 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 IGKV1-16P04430 117 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 CD2P06729 351 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 SCTP09683 121 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 GALP22466 123 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 PSMA1P25786 263 aaKnown RBP3.53□□□□□ -1.84
ATXN3-239ENST00000556315 BDKRB2P30411 391 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 GBX2P52951 348 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-239ENST00000556315 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 VBP1P61758 197 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 PPP3R1P63098 170 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 DEFA5Q01523 94 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 PJVKQ0ZLH3 352 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 EXOSC2Q13868 293 aaKnown RBP3.53□□□□□ -1.84
ATXN3-239ENST00000556315 DDI2Q5TDH0 399 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 GLT8D1Q68CQ7 371 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 OR4A47Q6IF82 309 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 WDR73Q6P4I2 378 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 AHSA2Q719I0 299 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 CCDC190Q86UF4 302 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 AKAP14Q86UN6 197 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 NR2C2APQ86WQ0 139 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 PDPNQ86YL7 162 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 SYS1Q8N2H4 156 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 GDPD1Q8N9F7 314 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 NECAP1Q8NC96 275 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 KCNG3Q8TAE7 436 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 MRPL30Q8TCC3 161 aaKnown RBP3.53□□□□□ -1.84
ATXN3-239ENST00000556315 APH1BQ8WW43 257 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 GGHQ92820 318 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 GALNT14Q96FL9 552 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 ABHD14BQ96IU4 210 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 PHB2Q99623 299 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 RARRES2Q99969 163 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 PDCD1LG2Q9BQ51 273 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 AGMATQ9BSE5 352 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 C6orf62Q9GZU0 229 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-239ENST00000556315 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 DIABLOQ9NR28 239 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 MLXQ9UH92 298 aa3.53□□□□□ -1.84
ATXN3-239ENST00000556315 EXOGQ9Y2C4 368 aaKnown RBP3.53□□□□□ -1.84
ATXN3-239ENST00000556315 DNAH2Q9P225 4427 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 TMEM213A2RRL7 107 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MPTX1A8MV57 137 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 FAM25AB3EWG3 89 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 FAM25CB3EWG5 89 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 FAM25GB3EWG6 89 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 PPP5D1E7EU14 171 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 E9PI62 339 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 HLA-AP01891 365 aaKnown RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 APOA2P02652 100 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 PRH1P02810 166 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 C8orf88P0DMB2 117 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 APELAP0DMC3 54 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 RPL35AP18077 110 aaKnown RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 CEACAM6P40199 344 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 CAMPP49913 170 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 RORCP51449 518 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 NCS1P62166 190 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 IFITM3Q01628 133 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 ST3GAL4Q11206 333 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MLLT11Q13015 90 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 HMGN3Q15651 99 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 LGALS9BQ3B8N2 356 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms