RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 UNQ6190/PRO20217Q6UXQ8 127 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 C7orf65Q6ZTY9 151 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 ZNF676Q8N7Q3 588 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 OR2T4Q8NH00 348 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 SLC35B4Q969S0 331 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 ERMAPQ96PL5 475 aaPredicted RBP0.8□□□□□ -2.28
SCFD1-218ENST00000556256 IL36BQ9NZH7 164 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 LHFPL6Q9Y693 200 aa0.8□□□□□ -2.28
SCFD1-218ENST00000556256 CCDC88CQ9P219 2028 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 NUMA1Q14980 2115 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.79□□□□□ -2.28
SCFD1-218ENST00000556256 A0A0J9YY10 115 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 A0A1B0GX78 115 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 MRPS14O60783 128 aaKnown RBP0.79□□□□□ -2.28
SCFD1-218ENST00000556256 NIPSNAP2O75323 286 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 IFNA5P01569 189 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 ANGP03950 147 aaKnown RBP0.79□□□□□ -2.28
SCFD1-218ENST00000556256 CLPSP04118 112 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 CALB1P05937 261 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 HIST1H1EP10412 219 aaKnown RBP0.79□□□□□ -2.28
SCFD1-218ENST00000556256 HAAOP46952 286 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 FXYD2P54710 66 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 SYPL2Q5VXT5 272 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 LPCAT4Q643R3 524 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 FAM173BQ6P4H8 233 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 IQCF2Q8IXL9 164 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 TMEM86AQ8N2M4 240 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 ZNF439Q8NDP4 499 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 MBD3L1Q8WWY6 194 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 ARL5BQ96KC2 179 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 PARD6GQ9BYG4 376 aaPredicted RBP0.79□□□□□ -2.28
SCFD1-218ENST00000556256 EFCAB1Q9HAE3 211 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 KIF24Q5T7B8 1368 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 TONSLQ96HA7 1378 aa0.79□□□□□ -2.28
SCFD1-218ENST00000556256 CPAMD8Q8IZJ3 1885 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 TRBV20OR9-2A0A075B6H5 130 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 A0A1B0GV50 99 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 EEF1E1-BLOC1S5C9J1V9 151 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 NOS1APO75052 506 aaPredicted RBP0.78□□□□□ -2.28
SCFD1-218ENST00000556256 PRM2P04554 102 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 TRGC1P0CF51 173 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 ZNF80P51504 273 aaPredicted RBP0.78□□□□□ -2.28
SCFD1-218ENST00000556256 SUPT4H1P63272 117 aaKnown RBP0.78□□□□□ -2.28
SCFD1-218ENST00000556256 UBE2IP63279 158 aaKnown RBP0.78□□□□□ -2.28
SCFD1-218ENST00000556256 IFITM2Q01629 132 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 KISS1Q15726 138 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 IMPG1Q17R60 797 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 IBA57Q5T440 356 aaKnown RBP0.78□□□□□ -2.28
SCFD1-218ENST00000556256 DHFR2Q86XF0 187 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 OR51D1Q8NGF3 324 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 OR8B3Q8NGG8 313 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 KLK6Q92876 244 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 CST9LQ9H4G1 147 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 GUCA1BQ9UMX6 200 aa0.78□□□□□ -2.28
SCFD1-218ENST00000556256 LSM5Q9Y4Y9 91 aaKnown RBP0.78□□□□□ -2.28
SCFD1-218ENST00000556256 PTPRSQ13332 1948 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 TGIF2-C20orf24A0A0A6YYL0 155 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 IRGMA1A4Y4 181 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 GGT3PA6NGU5 568 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 FABP5P3A8MUU1 101 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 SLC22A1O15245 554 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 ORC5O43913 435 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 AHSA1O95433 338 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 CRPP02741 224 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 RPSAP08865 295 aaKnown RBP0.77□□□□□ -2.29
SCFD1-218ENST00000556256 NFYAP23511 347 aaPredicted RBP0.77□□□□□ -2.29
SCFD1-218ENST00000556256 ZNF345Q14585 488 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 ELOBQ15370 118 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 GRK1Q15835 563 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 Q6ZS49 121 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 DCXRQ7Z4W1 244 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 Q8N2B8 174 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 C10orf105Q8TEF2 133 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 DERL1Q9BUN8 251 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 MRPS26Q9BYN8 205 aaKnown RBP0.77□□□□□ -2.29
SCFD1-218ENST00000556256 WDR61Q9GZS3 305 aaKnown RBP0.77□□□□□ -2.29
SCFD1-218ENST00000556256 PARVGQ9HBI0 331 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 CMTM6Q9NX76 183 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 BAIAP2Q9UQB8 552 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 ADCY9O60503 1353 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 SNAPC4Q5SXM2 1469 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 LAMB2P55268 1798 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 PRRC2BQ5JSZ5 2229 aaKnown RBP0.77□□□□□ -2.29
SCFD1-218ENST00000556256 SDK1Q7Z5N4 2213 aa0.77□□□□□ -2.29
SCFD1-218ENST00000556256 PTPRBP23467 1997 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 IGKV1D-43A0A0B4J1Z2 117 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 KCNK1O00180 336 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 IGKV1-5P01602 117 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 HIST1H1TP22492 207 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 ACOT6Q3I5F7 207 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 PTRHD1Q6GMV3 140 aaKnown RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 LRRC25Q8N386 305 aaPredicted RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 OR5B17Q8NGF7 314 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 MRPL30Q8TCC3 161 aaKnown RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 RASSF5Q8WWW0 418 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 IMP4Q96G21 291 aaKnown RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 OR52E6Q96RD3 313 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 ADAT1Q9BUB4 502 aaKnown RBP0.76□□□□□ -2.29
SCFD1-218ENST00000556256 FAM96AQ9H5X1 160 aa0.76□□□□□ -2.29
SCFD1-218ENST00000556256 MED9Q9NWA0 146 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms