RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 SMIM30A4D0T7 59 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 OR2T8A6NH00 312 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 A6NJ64 397 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 SULT1C2O00338 296 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 SSX5O60225 188 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
XRCC3-215ENST00000555964 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-215ENST00000555964 SFXN4Q6P4A7 337 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 GPHA2Q96T91 129 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 ETV7Q9Y603 341 aa12.57□□□□□ -0.4
XRCC3-215ENST00000555964 K7EMT4 169 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 TRAPPC2P0DI81 140 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 TRAPPC2BP0DI82 140 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 OR13C7P0DN81 318 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 GABARAPL2P60520 117 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 AADACL3Q5VUY0 350 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 SLC25A24Q6NUK1 477 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 HOGA1Q86XE5 327 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 NRG4Q8WWG1 115 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 CNBD2Q96M20 576 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 C20orf24Q9BUV8 137 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 TXNL4BQ9NX01 149 aaKnown RBP12.56□□□□□ -0.4
XRCC3-215ENST00000555964 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
XRCC3-215ENST00000555964 RRP15Q9Y3B9 282 aaKnown RBP12.56□□□□□ -0.4
XRCC3-215ENST00000555964 C15orf62A8K5M9 175 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 SERPINE2P07093 398 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 RPL35AP18077 110 aaKnown RBP12.55□□□□□ -0.4
XRCC3-215ENST00000555964 CBX5P45973 191 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 FXYD4P59646 89 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 HERV-K104P61576 105 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.47e-7■■■□□ 14.6
XRCC3-215ENST00000555964 LGALS9CQ6DKI2 356 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 OR51H1Q8NH63 302 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 GATAD1Q8WUU5 269 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-215ENST00000555964 FCGR1BQ92637 280 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 LSM10Q969L4 123 aaKnown RBP12.55□□□□□ -0.4
XRCC3-215ENST00000555964 MFFQ9GZY8 342 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 SSR3Q9UNL2 185 aa12.55□□□□□ -0.4
XRCC3-215ENST00000555964 RPA2P15927 270 aa12.54□□□□□ -0.4
XRCC3-215ENST00000555964 PSMB9P28065 219 aa12.54□□□□□ -0.4
XRCC3-215ENST00000555964 RELQ04864 619 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-215ENST00000555964 MAP6D1Q9H9H5 199 aa12.54□□□□□ -0.4
XRCC3-215ENST00000555964 DIABLOQ9NR28 239 aa12.54□□□□□ -0.4
XRCC3-215ENST00000555964 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
XRCC3-215ENST00000555964 KMT2AQ03164 3969 aa12.54□□□□□ -0.4
XRCC3-215ENST00000555964 TRAV18A0A075B6X5 111 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 MARCH11A6NNE9 402 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 SNAPC5O75971 98 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 S1PR2O95136 353 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 Q56UQ5 140 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 UBE2UQ5VVX9 321 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 ZNF818PQ6ZRF7 136 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 TMEM17Q86X19 198 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 CADM3Q8N126 398 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 OR10W1Q8NGF6 305 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 GIMAP1Q8WWP7 306 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 CMTM3Q96MX0 182 aa12.53□□□□□ -0.4
XRCC3-215ENST00000555964 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.4
XRCC3-215ENST00000555964 NUPL2O15504 423 aaKnown RBP12.52□□□□□ -0.41
XRCC3-215ENST00000555964 IFNA4P05014 189 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 CD5P06127 495 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 CTSDP07339 412 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-215ENST00000555964 WT1-ASQ06250 92 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 GVQW1Q8N7I0 195 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 TSPAN14Q8NG11 270 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 OR5AP2Q8NGF4 316 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 OR5B3Q8NH48 314 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 SCARB1Q8WTV0 552 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 TMEM56Q96MV1 263 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 CSTL1Q9H114 145 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 NDUFA4L2Q9NRX3 87 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 FKBP11Q9NYL4 201 aa12.52□□□□□ -0.41
XRCC3-215ENST00000555964 TEX50A0A1B0GTY4 177 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 TMEM127O75204 238 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 F2RP25116 425 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 TCTAP57738 103 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
XRCC3-215ENST00000555964 TSC22D3Q99576 134 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 RARRES2Q99969 163 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 CHRDL1Q9BU40 450 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 C11orf68Q9H3H3 251 aaKnown RBP12.51□□□□□ -0.41
XRCC3-215ENST00000555964 IFT46Q9NQC8 304 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 SMPXQ9UHP9 88 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 PRNDQ9UKY0 176 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
XRCC3-215ENST00000555964 PTHLHP12272 177 aa12.5□□□□□ -0.41
XRCC3-215ENST00000555964 SDC2P34741 201 aa12.5□□□□□ -0.41
XRCC3-215ENST00000555964 ADMP35318 185 aa12.5□□□□□ -0.41
XRCC3-215ENST00000555964 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
XRCC3-215ENST00000555964 RBMS2Q15434 407 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms