RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 POFUT2Q9Y2G5 429 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 U3KQ87 197 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 LRP1Q07954 4544 aaKnown RBP-0.24□□□□□ -2.45
SNX6-204ENST00000555541 TRAV1-1A0A0B4J248 108 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 GOLGA8QA0A0J9YX86 632 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 TEX50A0A1B0GTY4 177 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 CCDC160A6NGH7 325 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 M0R378 163 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 GP1BAP07359 652 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 CCDC172P0C7W6 258 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 CCL2P13500 99 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 RPS24P62847 133 aaKnown RBP-0.24□□□□□ -2.45
SNX6-204ENST00000555541 PSG9Q00887 426 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 PDE6HQ13956 83 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 SYCP1Q15431 976 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 HLA-DRB5Q30154 266 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 RNASE10Q5GAN6 216 aaKnown RBP-0.24□□□□□ -2.45
SNX6-204ENST00000555541 SPANXN5Q5MJ07 72 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 SBSNQ6UWP8 590 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 SOSTDC1Q6X4U4 206 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 ZNF826PQ6ZT77 177 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 HIST2H3AQ71DI3 136 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 OR7G1Q8NGA0 311 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 HAVCR2Q8TDQ0 301 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 SLC37A2Q8TED4 501 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 PRRT1Q99946 306 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 TLNRD1Q9H1K6 362 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 HES4Q9HCC6 221 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 CKLFQ9UBR5 152 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 AK3Q9UIJ7 227 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 COQ4Q9Y3A0 265 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 A0A1W2PP64 1363 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 MTUS2Q5JR59 1369 aa-0.24□□□□□ -2.45
SNX6-204ENST00000555541 C1orf232A0A0U1RR37 186 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 FABP5P3A8MUU1 101 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 KCNK1O00180 336 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 NDUFS8O00217 210 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CCRL2O00421 344 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 UBL3O95164 117 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 C1QAP02745 245 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CLPSP04118 112 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 REG1AP05451 166 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CTSDP07339 412 aaPredicted RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 HTR1AP08908 422 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 SRP19P09132 144 aaKnown RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CRYGAP11844 174 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CASQ1P31415 396 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 SSR2P43308 183 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CD151P48509 253 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 ZNF80P51504 273 aaPredicted RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 CARD18P57730 90 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 RHOGP84095 191 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 STX5Q13190 355 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 ZNHIT3Q15649 155 aaPredicted RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 C4orf26Q17RF5 130 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 SPRNQ5BIV9 151 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 TNFAIP8L3Q5GJ75 292 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 C6orf52Q5T4I8 152 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 FAM45BPQ6NSW5 357 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 C5orf46Q6UWT4 87 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 DPPA3Q6W0C5 159 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 Q6ZQT0 140 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 RIBC1Q8N443 379 aaPredicted RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 TMEM156Q8N614 296 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 OR2T4Q8NH00 348 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 SFT2D1Q8WV19 159 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 MSANTD3Q96H12 275 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 FAM103A1Q9BTL3 118 aaKnown RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 ULBP3Q9BZM4 244 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 ANAPC10Q9UM13 185 aa-0.25□□□□□ -2.45
SNX6-204ENST00000555541 COL1A1P02452 1464 aaPredicted RBP-0.25□□□□□ -2.45
SNX6-204ENST00000555541 IGHV1-69-2A0A0G2JMI3 117 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 LINC00854A0A1B0GVQ3 168 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 ZNF736B4DX44 427 aaPredicted RBP-0.26□□□□□ -2.45
SNX6-204ENST00000555541 GOLGA8MH3BSY2 632 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 LST1O00453 97 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 ACOX3O15254 700 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 CCL25O15444 150 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 SULT1B1O43704 296 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 KLF7O75840 302 aaPredicted RBP-0.26□□□□□ -2.45
SNX6-204ENST00000555541 IGLV3-1P01715 115 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 KRT7P08729 469 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 MGST1P10620 155 aaKnown RBP-0.26□□□□□ -2.45
SNX6-204ENST00000555541 LCN1P31025 176 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 FABP9Q0Z7S8 132 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 KISS1Q15726 138 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 FAM74A1Q5RGS3 127 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 SYPL2Q5VXT5 272 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.26□□□□□ -2.45
SNX6-204ENST00000555541 BPIFA4PQ86YQ2 179 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 OR4E2Q8NGC2 313 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 SCGB3A1Q96QR1 104 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 TSPAN32Q96QS1 320 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 DCSTAMPQ9H295 470 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 FKBP14Q9NWM8 211 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 IL36BQ9NZH7 164 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 TMEM14CQ9P0S9 112 aa-0.26□□□□□ -2.45
SNX6-204ENST00000555541 PEAK1Q9H792 1746 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 E9PCH4 1651 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 ADGRB2O60241 1585 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms