RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 GNB1P62873 340 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 SLC35B1P78383 322 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 FGL1Q08830 312 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 TMEM95Q3KNT9 176 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 ZNF546Q86UE3 836 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 PPP1R27Q86WC6 154 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 TEX45Q8NA69 505 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 RHOVQ96L33 236 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 MAGT1Q9H0U3 335 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 PARP11Q9NR21 331 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 SERTAD4Q9NUC0 356 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 NSG2Q9Y328 171 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 UPK2O00526 184 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 ST8SIA3O43173 380 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 CNIH1O95406 144 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 CA2P00918 260 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 NKX2-1P43699 371 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-218ENST00000555213 OR4A47Q6IF82 309 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 Q6ZS46 218 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 SSX9Q7RTT3 188 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 CENPVQ7Z7K6 275 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-218ENST00000555213 MMD2Q8IY49 270 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 OR4X2Q8NGF9 303 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 OR4A5Q8NH83 315 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 ARPC1AQ92747 370 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 BSCL2Q96G97 398 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-218ENST00000555213 CLCC1Q96S66 551 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 SPIN2AQ99865 258 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 SPIN2BQ9BPZ2 258 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 HSPB9Q9BQS6 159 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-218ENST00000555213 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
SHMT2-218ENST00000555213 LSM5Q9Y4Y9 91 aaKnown RBP8.61□□□□□ -1.03
SHMT2-218ENST00000555213 TET2Q6N021 2002 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-218ENST00000555213 CUBNO60494 3623 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 FXYD6-FXYD2A0A087WZ82 144 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 PIGBOS1A0A0B4J2F0 54 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 PSMB11A5LHX3 300 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 ARPC5O15511 151 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 KBTBD11O94819 623 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 NXPH3O95157 252 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 IGF1P05019 195 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 MYOD1P15172 320 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 AKR1C2P52895 323 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 CX3CL1P78423 397 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 FXYD3Q14802 87 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 PRSS8Q16651 343 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 PDLIM3Q53GG5 364 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-218ENST00000555213 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 ACOT7LQ6ZUV0 252 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 TMUB2Q71RG4 321 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 STPG2Q8N412 459 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 KCNRGQ8N5I3 272 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 THAP6Q8TBB0 222 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 QTRT1Q9BXR0 403 aaKnown RBP8.6□□□□□ -1.03
SHMT2-218ENST00000555213 WNT10AQ9GZT5 417 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 MFFQ9GZY8 342 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 TPSG1Q9NRR2 321 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 HSPB7Q9UBY9 170 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 HSPB11Q9Y547 144 aa8.6□□□□□ -1.03
SHMT2-218ENST00000555213 TRAV41A0A0B4J266 112 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 FAM90A26D6RGX4 464 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 E7EUB6 86 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 ATP6V0E1O15342 81 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 FBXO24O75426 580 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 SCGB1D2O95969 90 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 MAS1LP35410 378 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 S100A10P60903 97 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 TNFRSF9Q07011 255 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 TMEM267Q0VDI3 215 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-218ENST00000555213 TNXAQ16473 311 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 ECSCRQ19T08 205 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 THOC7Q6I9Y2 204 aaKnown RBP8.59□□□□□ -1.03
SHMT2-218ENST00000555213 ZNF429Q86V71 674 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 COMMD1Q8N668 190 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 RNASE11Q8TAA1 199 aaKnown RBP8.59□□□□□ -1.03
SHMT2-218ENST00000555213 TMEM167AQ8TBQ9 72 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 NOL4LQ96MY1 436 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-218ENST00000555213 AQP10Q96PS8 301 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 RBKSQ9H477 322 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 ZNF430Q9H8G1 570 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-218ENST00000555213 CYTL1Q9NRR1 136 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 TMEM14BQ9NUH8 114 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 BET1LQ9NYM9 111 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 STAB1Q9NY15 2570 aa8.59□□□□□ -1.03
SHMT2-218ENST00000555213 TEX50A0A1B0GTY4 177 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 A0A1B0GW64 132 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 FAM24AA6NFZ4 105 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 CGB1A6NKQ9 187 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 E5RGE8 158 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 FCN1O00602 326 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 SYNGR2O43760 224 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 SNAPC5O75971 98 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 RLN2P04090 185 aa8.58□□□□□ -1.04
SHMT2-218ENST00000555213 FGF2P09038 288 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms