RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
NEDD1-207ENST00000555114 SLC25A24Q6NUK1 477 aa11.48□□□□□ -0.57
NEDD1-207ENST00000555114 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
NEDD1-207ENST00000555114 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
NEDD1-207ENST00000555114 PLEKHA2Q9HB19 425 aa11.48□□□□□ -0.57
NEDD1-207ENST00000555114 TMEM140Q9NV12 185 aa11.48□□□□□ -0.57
NEDD1-207ENST00000555114 TRAPPC2P0DI81 140 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 TRAPPC2BP0DI82 140 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 RPA2P15927 270 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 ODF3L2Q3SX64 289 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 AADACL3Q5VUY0 350 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 LGALS9CQ6DKI2 356 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 LGALS14Q8TCE9 139 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 MFFQ9GZY8 342 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 MAP6D1Q9H9H5 199 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 RHBDL2Q9NX52 303 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 COMMD9Q9P000 198 aa11.47□□□□□ -0.57
NEDD1-207ENST00000555114 RRP15Q9Y3B9 282 aaKnown RBP11.47□□□□□ -0.57
NEDD1-207ENST00000555114 K7EMT4 169 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 SERPINE2P07093 398 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 FGF9P31371 208 aaPredicted RBP11.46□□□□□ -0.57
NEDD1-207ENST00000555114 SCAND1P57086 179 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 FXYD4P59646 89 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 SFXN4Q6P4A7 337 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
NEDD1-207ENST00000555114 OR1L8Q8NGR8 309 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 OR51H1Q8NH63 302 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
NEDD1-207ENST00000555114 LSM10Q969L4 123 aaKnown RBP11.46□□□□□ -0.57
NEDD1-207ENST00000555114 TXNL4BQ9NX01 149 aaKnown RBP11.46□□□□□ -0.57
NEDD1-207ENST00000555114 TRAV18A0A075B6X5 111 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 A0A0A6YYH2 397 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 A6NJ64 397 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 C15orf62A8K5M9 175 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 MRPS14O60783 128 aaKnown RBP11.45□□□□□ -0.58
NEDD1-207ENST00000555114 S1PR2O95136 353 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 HERV-K104P61576 105 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 Q56UQ5 140 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 UBAC2Q8NBM4 344 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 OR10W1Q8NGF6 305 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 OR5B3Q8NH48 314 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 GATAD1Q8WUU5 269 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 SSR3Q9UNL2 185 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 ETV7Q9Y603 341 aa11.45□□□□□ -0.58
NEDD1-207ENST00000555114 F11RQ9Y624 299 aaKnown RBP11.45□□□□□ -0.58
NEDD1-207ENST00000555114 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 IFNA4P05014 189 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 CTSDP07339 412 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-207ENST00000555114 PSMB9P28065 219 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 CBX5P45973 191 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 GABARAPL2P60520 117 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
NEDD1-207ENST00000555114 ZNF818PQ6ZRF7 136 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 TMEM17Q86X19 198 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 GVQW1Q8N7I0 195 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 TSPAN14Q8NG11 270 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 GIMAP1Q8WWP7 306 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 RARRES2Q99969 163 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 HINT2Q9BX68 163 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 CSTL1Q9H114 145 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
NEDD1-207ENST00000555114 TEX50A0A1B0GTY4 177 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 MARCH11A6NNE9 402 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 NUPL2O15504 423 aaKnown RBP11.43□□□□□ -0.58
NEDD1-207ENST00000555114 DEDDO75618 318 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 SNAPC5O75971 98 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 PTHLHP12272 177 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 WT1-ASQ06250 92 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 RBMS2Q15434 407 aaKnown RBP11.43□□□□□ -0.58
NEDD1-207ENST00000555114 SCARB1Q8WTV0 552 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 FCGR1BQ92637 280 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 TMEM56Q96MV1 263 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 FKBP11Q9NYL4 201 aa11.43□□□□□ -0.58
NEDD1-207ENST00000555114 IGHV3-21A0A0B4J1V1 117 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 ZNF207O43670 478 aaKnown RBP11.42□□□□□ -0.58
NEDD1-207ENST00000555114 FCGR2BP31994 310 aaPredicted RBP11.42□□□□□ -0.58
NEDD1-207ENST00000555114 PAFAH1B2P68402 229 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 UBE2UQ5VVX9 321 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 IZUMO2Q6UXV1 221 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 APRG1Q8IVJ8 170 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 OR5AP2Q8NGF4 316 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 C11orf45Q8TAV5 145 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 KRTAP17-1Q9BYP8 105 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
NEDD1-207ENST00000555114 IFT46Q9NQC8 304 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 NDUFA4L2Q9NRX3 87 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 FBXL17Q9UF56 701 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 SMPXQ9UHP9 88 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 PRNDQ9UKY0 176 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 OR51B2Q9Y5P1 312 aa11.42□□□□□ -0.58
NEDD1-207ENST00000555114 IGHV3OR16-8A0A075B7F1 116 aa11.41□□□□□ -0.58
NEDD1-207ENST00000555114 ANKRD65E5RJM6 399 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms