RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CENPN	Q96H22	339 aa	Predicted RBP	3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	KCTD7	Q96MP8	289 aa		3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR5B12	Q96R08	314 aa		3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	ALX4	Q9H161	411 aa	Predicted RBP	3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	GMPPB	Q9Y5P6	360 aa		3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	WSB1	Q9Y6I7	421 aa		3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	KIAA2026	Q5HYC2	2103 aa		3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	DSCAML1	Q8TD84	2053 aa		3.77	□□□□□ -1.81
PSMC6-208	ENST00000554956	C12orf77	C9JDV5	145 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956		I3L521	148 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	PHOX2A	O14813	284 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	SOX15	O60248	233 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	RAMP3	O60896	148 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	LALBA	P00709	142 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	CA1	P00915	261 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	IGHG4	P01861	327 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	GAPDH	P04406	335 aa	Known RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OCM2	P0CE71	109 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OCM	P0CE72	109 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	LIMS3	P0CW19	117 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	LIMS4	P0CW20	117 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	RCC1	P18754	421 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	SLC6A1	P30531	599 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	P2RY1	P47900	373 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	ARHGDIB	P52566	201 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	MFAP2	P55001	183 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	RBM11	P57052	281 aa	Known RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	SLC35B1	P78383	322 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	ADARB1	P78563	741 aa	Known RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	NDP	Q00604	133 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	GNMT	Q14749	295 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	UNQ9370/PRO34162	Q6UXP9	181 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	COMMD1	Q8N668	190 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR11H1	Q8NG94	326 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR5D14	Q8NGL3	314 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR2T10	Q8NGZ9	312 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR8U1	Q8NH10	309 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR52N1	Q8NH53	320 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR5AK2	Q8NH90	309 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR1L1	Q8NH94	360 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	RHOXF1	Q8NHV9	184 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	KCNG3	Q8TAE7	436 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	MUC7	Q8TAX7	377 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	C4orf3	Q8WVX3	66 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	APH1B	Q8WW43	257 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	TRUB1	Q8WWH5	349 aa	Known RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	PYDC1	Q8WXC3	89 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	DCUN1D4	Q92564	292 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	ARL11	Q969Q4	196 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	SLC29A1	Q99808	456 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	RHOF	Q9HBH0	211 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	SLC2A8	Q9NY64	477 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	IL36G	Q9NZH8	169 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	ZNF107	Q9UII5	783 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	ZNF221	Q9UK13	617 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	ST3GAL6	Q9Y274	331 aa		3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	3.76	□□□□□ -1.81
PSMC6-208	ENST00000554956	TRAV8-7	A0A075B6U6	113 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	IGHV7-81	A0A0B4J1V7	117 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	TMEM30CP	A0ZSE6	113 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	RPL37AP8	A6NKH3	93 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	TMEM212	A6NML5	194 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	C3orf84	H3BNL1	204 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956		L7N2F9	121 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	WRB	O00258	174 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SDCBP	O00560	298 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	FCN1	O00602	326 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	MPZL2	O60487	215 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR7C1	O76099	320 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	MOS	P00540	346 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	RPSA	P08865	295 aa	Known RBP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SPN	P16150	400 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	IGFBP3	P17936	291 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	RAB3A	P20336	220 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	GZMH	P20718	246 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SERPINA2	P20848	420 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	CD1B	P29016	333 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	ETV1	P50549	477 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	ZNF137P	P52743	207 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	RPS11	P62280	158 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	RSU1	Q15404	277 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SLC22A6	Q4U2R8	563 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	C6orf226	Q5I0X4	101 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	NHLRC3	Q5JS37	347 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	ZNF506	Q5JVG8	444 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	ATAD3C	Q5T2N8	411 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SYT6	Q5T7P8	510 aa	Predicted RBP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR2G6	Q5TZ20	316 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	C1orf146	Q5VVC0	180 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	LEMD1	Q68G75	181 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	ZFAND6	Q6FIF0	208 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	KRTAP5-1	Q6L8H4	278 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SLC25A48	Q6ZT89	311 aa	Known RBP	3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	PRSS48	Q7RTY5	328 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	LYPD6	Q86Y78	171 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	LINC01561	Q8N1V8	128 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	SYS1	Q8N2H4	156 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	CBR4	Q8N4T8	237 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR10A7	Q8NGE5	316 aa		3.75	□□□□□ -1.81
PSMC6-208	ENST00000554956	OR52I1	Q8NGK6	324 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms