RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 COMMD9Q9P000 198 aa9.9□□□□□ -0.82
TUBB3-207ENST00000554927 E7EUB6 86 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 SNAPC5O75971 98 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 IGHV3-23P01764 117 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 HLA-AP01891 365 aaKnown RBP9.89□□□□□ -0.83
TUBB3-207ENST00000554927 PMP2P02689 132 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 REG1AP05451 166 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 FGF2P09038 288 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 FOLR2P14207 255 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 GNRHRP30968 328 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 RFX2P48378 723 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 OR2B8PP59922 312 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 TSPAN5P62079 268 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 POU2AF1Q16633 256 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 LPCAT3Q6P1A2 487 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 OR52B4Q8NGK2 314 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
TUBB3-207ENST00000554927 YIPF6Q96EC8 236 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 FANCD2OSQ96PS1 177 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 TMEM140Q9NV12 185 aa9.89□□□□□ -0.83
TUBB3-207ENST00000554927 C2orf70A6NJV1 201 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 SPRY2O43597 315 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 PGLYRP1O75594 196 aaPredicted RBP9.88□□□□□ -0.83
TUBB3-207ENST00000554927 S1PR2O95136 353 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 CLEC3BP05452 202 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 CBLN1P23435 193 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 F2RP25116 425 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 BMI1P35226 326 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 TGFBR1P36897 503 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 TMEM217Q8N7C4 229 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 SLC25A46Q96AG3 418 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 MOB3AQ96BX8 217 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 CMTM3Q96MX0 182 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 QTRT1Q9BXR0 403 aaKnown RBP9.88□□□□□ -0.83
TUBB3-207ENST00000554927 FKBP11Q9NYL4 201 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 COMMD3Q9UBI1 195 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 S4R3C0 116 aa9.88□□□□□ -0.83
TUBB3-207ENST00000554927 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 MARCH11A6NNE9 402 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 GPR31O00270 319 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 RLN1P04808 185 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 MYOD1P15172 320 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 RPA2P15927 270 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 NAT1P18440 290 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 EDN2P20800 178 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 LPAR6P43657 344 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 KLK9Q2XQG4 91 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 DEFB135Q30KP9 77 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 ANKRD55Q3KP44 614 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 ZNF57Q68EA5 555 aaPredicted RBP9.87□□□□□ -0.83
TUBB3-207ENST00000554927 SLC25A24Q6NUK1 477 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 PLET1Q6UQ28 207 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 C19orf35Q6ZS72 473 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 MARC2Q969Z3 335 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 DGCR14Q96DF8 476 aaKnown RBP9.87□□□□□ -0.83
TUBB3-207ENST00000554927 TSC22D3Q99576 134 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 HINT2Q9BX68 163 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 ZC4H2Q9NQZ6 224 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 KLK9Q9UKQ9 250 aa9.87□□□□□ -0.83
TUBB3-207ENST00000554927 TRAV3A0A0B4J244 114 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 A0A1B0GW64 132 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 SCAF4O95104 1147 aaKnown RBP9.86□□□□□ -0.83
TUBB3-207ENST00000554927 KRASP01116 189 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 APOA1P02647 267 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 OR13C7P0DN81 318 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 PTBP1P26599 531 aaKnown RBP eCLIP9.86□□□□□ -0.832e-42■■■■■ 46.6
TUBB3-207ENST00000554927 HLA-DMAP28067 261 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 MZT2AQ6P582 158 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 WFDC3Q8IUB2 231 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 UXS1Q8NBZ7 420 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 OR1L6Q8NGR2 347 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 VN1R17PQ8TDU5 208 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 CCDC140Q96MF4 163 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 TMEM56Q96MV1 263 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 SCPEP1Q9HB40 452 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 PRNDQ9UKY0 176 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 TP53TG1Q9Y2A0 90 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 UFC1Q9Y3C8 167 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 DMRT1Q9Y5R6 373 aa9.86□□□□□ -0.83
TUBB3-207ENST00000554927 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 IGLC7A0M8Q6 106 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 SERPINE2P07093 398 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 GPR183P32249 361 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 HRH1P35367 487 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 RORCP51449 518 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 APOC4P55056 127 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 PRR20EP86478 221 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 PRR20CP86479 221 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 PRR20DP86480 221 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 PRR20BP86481 221 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 PRR20AP86496 221 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 RBPMS2Q6ZRY4 209 aaKnown RBP9.85□□□□□ -0.83
TUBB3-207ENST00000554927 CADM3Q8N126 398 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 GDPD1Q8N9F7 314 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 CACNG8Q8WXS5 425 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 AP3S1Q92572 193 aa9.85□□□□□ -0.83
TUBB3-207ENST00000554927 LSM10Q969L4 123 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms