RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 NDUFA4L2Q9NRX3 87 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 ZFP57Q9NU63 452 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 THYN1Q9P016 225 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 CACNG5Q9UF02 275 aa6.34□□□□□ -1.39
LINC01397-201ENST00000554808 A0A0G2JLM5 398 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 TEX50A0A1B0GTY4 177 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 C7orf66A4D0T2 115 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 MSGN1A6NI15 193 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 SH2D7A6NKC9 451 aaPredicted RBP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 CORTO00230 105 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 IFNA17P01571 189 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 HOXB5P09067 269 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 PPIFP30405 207 aaKnown RBP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 SUB1P53999 127 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 ATP5IP56385 69 aaPredicted RBP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 OR2B8PP59922 312 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 NDPQ00604 133 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 CFHR3Q02985 330 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 TATDN3Q17R31 274 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 TMEM95Q3KNT9 176 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 C19orf54Q5BKX5 351 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 SHISA2Q6UWI4 295 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 Q6ZS46 218 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 TTC9CQ8N5M4 171 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 C3orf56Q8N813 242 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 RNF152Q8N8N0 203 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 ZNF114Q8NC26 417 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 OR5AU1Q8NGC0 362 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 OR52B4Q8NGK2 314 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 OR1S1Q8NH92 325 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 WIPF2Q8TF74 440 aaPredicted RBP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 GPR146Q96CH1 333 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 CIB3Q96Q77 187 aaPredicted RBP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 FYTTD1Q96QD9 318 aaKnown RBP6.33□□□□□ -1.4
LINC01397-201ENST00000554808 ZNF747Q9BV97 191 aa6.33□□□□□ -1.4
LINC01397-201ENST00000554808 TRAV3A0A0B4J244 114 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 A0A0B4J293 547 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 A0A0G2JRQ6 117 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 IGLC7A0M8Q6 106 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 FAM223BA6NKX1 122 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 TEX22C9J3V5 150 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 HAX1O00165 279 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 WRBO00258 174 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 ST8SIA3O43173 380 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 CRYGCP07315 174 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 EGR2P11161 476 aaPredicted RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 DEFA4P12838 97 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 CTRB1P17538 263 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 PSMB8P28062 276 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 PSMB6P28072 239 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 RPP30P78346 268 aaKnown RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 CYCSP99999 105 aaKnown RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 TNFRSF9Q07011 255 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 KLK9Q2XQG4 91 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 GGNBP1Q5YKI7 109 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 CTRB2Q6GPI1 263 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 GSG1LQ6UXU4 331 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 FAM223AQ8IWN6 122 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 ASB13Q8WXK3 278 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 RBMXL1Q96E39 390 aaKnown RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 USMG5Q96IX5 58 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 NOL4LQ96MY1 436 aaPredicted RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 SEC22CQ9BRL7 303 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 FAM103A1Q9BTL3 118 aaKnown RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 HIPK2Q9H2X6 1198 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 HSPB7Q9UBY9 170 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 KLK9Q9UKQ9 250 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 NSG2Q9Y328 171 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 FBXO7Q9Y3I1 522 aa6.32□□□□□ -1.4
LINC01397-201ENST00000554808 TSSC4Q9Y5U2 329 aaPredicted RBP6.32□□□□□ -1.4
LINC01397-201ENST00000554808 WNK1Q9H4A3 2382 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 CEBPZOSA8MTT3 80 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 G3V318 75 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 SSNA1O43805 119 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 PITX3O75364 302 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 SCAF4O95104 1147 aaKnown RBP6.31□□□□□ -1.4
LINC01397-201ENST00000554808 PET100P0DJ07 73 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 SNCAP37840 140 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 HTR2BP41595 481 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 NKX2-1P43699 371 aaPredicted RBP6.31□□□□□ -1.4
LINC01397-201ENST00000554808 HOXA1P49639 335 aaPredicted RBP6.31□□□□□ -1.4
LINC01397-201ENST00000554808 CD83Q01151 205 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 IAH1Q2TAA2 248 aaPredicted RBP6.31□□□□□ -1.4
LINC01397-201ENST00000554808 C10orf55Q5SWW7 151 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 ZNF329Q86UD4 541 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 NDUFA11Q86Y39 141 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 OR2C3Q8N628 320 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 UXS1Q8NBZ7 420 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 OR1P1Q8NH06 330 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 C2orf50Q96LR7 162 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 ATP6V0BQ99437 205 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 CITED1Q99966 193 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 HINT2Q9BX68 163 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
LINC01397-201ENST00000554808 WSB1Q9Y6I7 421 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms