RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 DEFB113Q30KQ7 82 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 ABCA11PQ4W5N1 156 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 TPTE2P1Q5T6R2 138 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 ASPHD1Q5U4P2 390 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 OR4A47Q6IF82 309 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 PRSS54Q6PEW0 395 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF66Q6ZN08 573 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 TMUB2Q71RG4 321 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 SSX9Q7RTT3 188 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 MOB3BQ86TA1 216 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF565Q8N9K5 539 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 TCTEX1D2Q8WW35 142 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 TAF15Q92804 592 aaKnown RBP eCLIP4.64□□□□□ -1.67
ATXN3-230ENST00000554673 RAB1CQ92928 201 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 IL22RA2Q969J5 263 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 LSM10Q969L4 123 aaKnown RBP4.64□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF48Q96MX3 618 aaPredicted RBP4.64□□□□□ -1.67
ATXN3-230ENST00000554673 AQP10Q96PS8 301 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 SCRT1Q9BWW7 348 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 ARV1Q9H2C2 271 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 RBKSQ9H477 322 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 RANBP3Q9H6Z4 567 aaPredicted RBP4.64□□□□□ -1.67
ATXN3-230ENST00000554673 HSPB11Q9Y547 144 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 CCDC168Q8NDH2 2452 aa4.64□□□□□ -1.67
ATXN3-230ENST00000554673 SONP18583 2426 aaKnown RBP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 C5orf51A6NDU8 294 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 H3BP45 60 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 M0R1W7 72 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 UPK2O00526 184 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 TIMM23O14925 209 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 RBFOX2O43251 390 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 EIF3GO75821 320 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 OR2F2O95006 317 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 VENTXO95231 258 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 LIPFP07098 398 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 FAM157CP0CG43 387 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 IAPPP10997 89 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 VDAC1P21796 283 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 PSMB6P28072 239 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 BSXQ3C1V8 233 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 FAM74A1Q5RGS3 127 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 RPL7L1Q6DKI1 246 aaKnown RBP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 LPCAT3Q6P1A2 487 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 SSX7Q7RTT5 188 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 FOXRED2Q8IWF2 684 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 KIR3DL3Q8N743 410 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 CCDC71LQ8N9Z2 235 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 OR10W1Q8NGF6 305 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 OR9G1Q8NH87 305 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 HSD17B10Q99714 261 aaKnown RBP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 GSKIPQ9P0R6 139 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 ONECUT1Q9UBC0 465 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 LSM5Q9Y4Y9 91 aaKnown RBP4.63□□□□□ -1.67
ATXN3-230ENST00000554673 MMP24Q9Y5R2 645 aa4.63□□□□□ -1.67
ATXN3-230ENST00000554673 AP4M1O00189 453 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 RRHO14718 337 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 RAB29O14966 203 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 CHST1O43916 411 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 SLC25A6P12236 298 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 SAA4P35542 130 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 DVL1P1P54792 670 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 EWSR1Q01844 656 aaKnown RBP eCLIP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 WT1-ASQ06250 92 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TNFRSF9Q07011 255 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM267Q0VDI3 215 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 FOXL1Q12952 345 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 EXOSC2Q13868 293 aaKnown RBP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 CLEC12BQ2HXU8 276 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 PDLIM3Q53GG5 364 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 Q5PR19 223 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM14EPQ6UXP3 125 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 BRD3OSQ6XYD6 125 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM182Q6ZP80 229 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM252Q8N6L7 170 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 OR13D1Q8NGV5 346 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 COQ8AQ8NI60 647 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 HYLS1Q96M11 299 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM68Q96MH6 324 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 C8orf49Q96NF6 230 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 SCGB3A2Q96PL1 93 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 CLEC7AQ9BXN2 247 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 REG4Q9BYZ8 158 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 SMIM3Q9BZL3 60 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 MEGF9Q9H1U4 602 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 SH3BGRL3Q9H299 93 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 GAL3ST2Q9H3Q3 398 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 FAM212BQ9NTI7 297 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-230ENST00000554673 SLC35D1Q9NTN3 355 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM14BQ9NUH8 114 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TCF19Q9Y242 345 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TMED3Q9Y3Q3 217 aa4.62□□□□□ -1.67
ATXN3-230ENST00000554673 TRGV11A0A075B6L2 103 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 TEX50A0A1B0GTY4 177 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 A0A1B0GU03 582 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 DUXBA0A1W2PPF3 345 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 IGLC7A0M8Q6 106 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 C15orf61A6NNL5 157 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 TEX46H3BTG2 121 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms