RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GNB2P62879 340 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 TNFRSF9Q07011 255 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 HERPUD1Q15011 391 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 LCN15Q6UWW0 184 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 C16orf82Q7Z2V1 217 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 P4HA3Q7Z4N8 544 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 CALHM1Q8IU99 346 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 C1orf174Q8IYL3 243 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF645Q8N7E2 425 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 OR56B2PQ8NGI1 322 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 OR10D3Q8NH80 312 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 OR5P3Q8WZ94 311 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 SARAFQ96BY9 339 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 SRXN1Q9BYN0 137 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 RBKSQ9H477 322 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 RAB9BQ9NP90 201 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 BEX4Q9NWD9 120 aaPredicted RBP4.9□□□□□ -1.63
VPS33B-203ENST00000554264 WIPI2Q9Y4P8 454 aa4.9□□□□□ -1.63
VPS33B-203ENST00000554264 INTS1Q8N201 2190 aaKnown RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 HCFC1P51610 2035 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 KIR2DL5BA0A0G2JN68 375 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 KIR2DL5BA0A0G2JPC4 375 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 A8MXE2 369 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 FNDC10F2Z333 226 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 SH2D1BO14796 132 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 RAB29O14966 203 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 WDR1O75083 606 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 MMP23AO75900 390 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 NXPH2O95156 264 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 KRASP01116 189 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 MT-ND6P03923 174 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 NHLRC4P0CG21 123 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ESDP10768 282 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 PSG2P11465 335 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 NDUFB7P17568 137 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ANOS1P23352 680 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 CDC34P49427 236 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ASCL1P50553 236 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 GPM6AP51674 278 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ELLP55199 621 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 TPPP2P59282 170 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 PAX5Q02548 391 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 MZT1Q08AG7 82 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM267Q0VDI3 215 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 GTF3C1Q12789 2109 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 GAGE1Q13065 139 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 DAZAP2Q15038 168 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 USF2Q15853 346 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 RTL8BQ17RB0 113 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 AARDQ4LEZ3 155 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 C1orf194Q5T5A4 169 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 CYB5R2Q6BCY4 276 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF497Q6ZNH5 498 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 KIR2DL5AQ8N109 375 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 GBGT1Q8N5D6 347 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 OR10G9Q8NGN4 311 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 OR10G7Q8NGN6 311 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM190Q8WZ59 177 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 DYRK2Q92630 601 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 CORO2AQ92828 525 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 JSRP1Q96MG2 331 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ALKBH3Q96Q83 286 aaPredicted RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 OR4C12Q96R67 309 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 HSD17B10Q99714 261 aaKnown RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ABHD14AQ9BUJ0 271 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 DEFB127Q9H1M4 99 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 PARLQ9H300 379 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 ZDHHC11Q9H8X9 412 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 PROK2Q9HC23 129 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 MTCH1Q9NZJ7 389 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 GAB2Q9UQC2 676 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 RBM7Q9Y580 266 aaKnown RBP4.89□□□□□ -1.63
VPS33B-203ENST00000554264 FAM215AQ9Y5M1 114 aa4.89□□□□□ -1.63
VPS33B-203ENST00000554264 IGHV3-15A0A0B4J1V0 119 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 IGKV1-6A0A0C4DH72 117 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 UBE2L5PA0A1B0GUS4 154 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 MDFIC2A0A1B0GVS7 189 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1W2PPQ1 181 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM30CPA0ZSE6 113 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 OOEPA6NGQ2 149 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 LRRC30A6NM36 301 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TCAPO15273 167 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 MLNRO43193 412 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 RBFOX2O43251 390 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS33B-203ENST00000554264 CXCL13O43927 109 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 LY6G6DO95868 133 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 IGHG3P01860 377 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 GYPAP02724 150 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 LINC00614P0C842 121 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 CD1BP29016 333 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 KIR2DS2P43631 304 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 YPEL3P61236 119 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-203ENST00000554264 SELENOTP62341 195 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 FHL3Q13643 280 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF146Q15072 292 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM183BQ1AE95 376 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 PDLIM3Q53GG5 364 aaPredicted RBP4.88□□□□□ -1.63
VPS33B-203ENST00000554264 SPANXN5Q5MJ07 72 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 C1orf185Q5T7R7 199 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms