RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CXCL2P19875 107 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 SRP14P37108 136 aaKnown RBP6.09□□□□□ -1.43
TDP1-209ENST00000554180 IER3P46695 156 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 RPL27AP46776 148 aaKnown RBP6.09□□□□□ -1.43
TDP1-209ENST00000554180 CAV2P51636 162 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 PAX9P55771 341 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 PJVKQ0ZLH3 352 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 TNXAQ16473 311 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 LGALSLQ3ZCW2 172 aaPredicted RBP6.09□□□□□ -1.43
TDP1-209ENST00000554180 FBLN7Q53RD9 439 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 TMEM14EPQ6UXP3 125 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 ZNF562Q6V9R5 426 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 STX12Q86Y82 276 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 STPG2Q8N412 459 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 KCNRGQ8N5I3 272 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 TMEM86BQ8N661 226 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 Q8N9W7 124 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 ZDHHC16Q969W1 377 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 RBMXL1Q96E39 390 aaKnown RBP6.09□□□□□ -1.43
TDP1-209ENST00000554180 RASL11BQ9BPW5 248 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 SLC25A33Q9BSK2 321 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 HEYLQ9NQ87 328 aaPredicted RBP6.09□□□□□ -1.43
TDP1-209ENST00000554180 YAE1D1Q9NRH1 226 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 PSENENQ9NZ42 101 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 STRAPQ9Y3F4 350 aaKnown RBP6.09□□□□□ -1.43
TDP1-209ENST00000554180 HSPB11Q9Y547 144 aa6.09□□□□□ -1.43
TDP1-209ENST00000554180 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 HIVEP1P15822 2718 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 MSGN1A6NI15 193 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 TAAR5O14804 337 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 BCL2L11O43521 198 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 IAPPP10997 89 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 CD99P14209 185 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 S100A11P31949 105 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 HTR2BP41595 481 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 SULT1A1P50225 295 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 HBG1P69891 147 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 HBG2P69892 147 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 SSBP2P81877 361 aaPredicted RBP6.08□□□□□ -1.44
TDP1-209ENST00000554180 ERHP84090 104 aaKnown RBP6.08□□□□□ -1.44
TDP1-209ENST00000554180 EWSR1Q01844 656 aaKnown RBP eCLIP6.08□□□□□ -1.44
TDP1-209ENST00000554180 BSXQ3C1V8 233 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 C10orf55Q5SWW7 151 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 Q6YL49 198 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 TMUB2Q71RG4 321 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 BCL6BQ8N143 479 aaPredicted RBP6.08□□□□□ -1.44
TDP1-209ENST00000554180 TMEM252Q8N6L7 170 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 C5orf56Q8N8D9 126 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 ZNF114Q8NC26 417 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 SLC24A4Q8NFF2 622 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 SRSF12Q8WXF0 261 aaKnown RBP6.08□□□□□ -1.44
TDP1-209ENST00000554180 ARPC1AQ92747 370 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 HINT2Q9BX68 163 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 ARL6Q9H0F7 186 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 CDC42EP3Q9UKI2 254 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 VPREB3Q9UKI3 123 aa6.08□□□□□ -1.44
TDP1-209ENST00000554180 NSD1Q96L73 2696 aaPredicted RBP6.08□□□□□ -1.44
TDP1-209ENST00000554180 IGHV7-81A0A0B4J1V7 117 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 MDFIC2A0A1B0GVS7 189 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 A0A1B0GW64 132 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 KANTRA0A1W2PQU2 76 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 IGLC7A0M8Q6 106 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 IGSF23A1L1A6 192 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 FAM24AA6NFZ4 105 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 CGB1A6NKQ9 187 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 C15orf62A8K5M9 175 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 TEX22C9J3V5 150 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 H3BP45 60 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 FCN1O00602 326 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 KCNAB3O43448 404 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 TSPAN9O75954 239 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 CNIH1O95406 144 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 LY6G6DO95868 133 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 IFNA10P01566 189 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 MYOD1P15172 320 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 NPY1RP25929 384 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 SNCAP37840 140 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 RAB11AP62491 216 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 GNB1P62873 340 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 CX3CL1P78423 397 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 FXYD3Q14802 87 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 C2orf83Q53S99 150 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 SPINK9Q5DT21 86 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 SPANXN5Q5MJ07 72 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 TMEM219Q86XT9 240 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 C22orf15Q8WYQ4 148 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 PINX1Q96BK5 328 aaKnown RBP6.07□□□□□ -1.44
TDP1-209ENST00000554180 TMEM68Q96MH6 324 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 ZNF48Q96MX3 618 aaPredicted RBP6.07□□□□□ -1.44
TDP1-209ENST00000554180 OR4C12Q96R67 309 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 ARPC5LQ9BPX5 153 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 ZC4H2Q9NQZ6 224 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 ZNF580Q9UK33 172 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 SOX21Q9Y651 276 aaPredicted RBP6.07□□□□□ -1.44
TDP1-209ENST00000554180 F8P00451 2351 aa6.07□□□□□ -1.44
TDP1-209ENST00000554180 MAST4O15021 2626 aa6.06□□□□□ -1.44
TDP1-209ENST00000554180 NPIPB5A8MRT5 1133 aa6.06□□□□□ -1.44
TDP1-209ENST00000554180 E7EUB6 86 aa6.06□□□□□ -1.44
TDP1-209ENST00000554180 CLDN34H7C241 214 aa6.06□□□□□ -1.44
TDP1-209ENST00000554180 CORTO00230 105 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms