RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 MAS1LP35410 378 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 SERPINB10P48595 397 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 FAM3BP58499 235 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-224ENST00000554040 RPS11P62280 158 aaKnown RBP eCLIP4.86□□□□□ -1.63
ATXN3-224ENST00000554040 RPS27AP62979 156 aaKnown RBP4.86□□□□□ -1.63
ATXN3-224ENST00000554040 PAFAH1B2P68402 229 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 FLOT2Q14254 428 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 OR2G6Q5TZ20 316 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 FAM90A2PQ658T7 463 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 LEMD1Q68G75 181 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 OR10K2Q6IF99 312 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 MORN3Q6PF18 240 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-224ENST00000554040 STHQ8IWL8 128 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 LYPD1Q8N2G4 141 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 GBGT1Q8N5D6 347 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 OR6M1Q8NGM8 313 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 SMIM19Q96E16 107 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 CMTM3Q96MX0 182 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 OR2A7Q96R45 310 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 NICN1Q9BSH3 213 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 DCUN1D5Q9BTE7 237 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 C20orf24Q9BUV8 137 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 RHPN1-AS1Q9BWJ2 59 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 AMBNQ9NP70 447 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 SMPD3Q9NY59 655 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-224ENST00000554040 AASSQ9UDR5 926 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 TBC1D24Q9ULP9 559 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 ARL2BPQ9Y2Y0 163 aa4.86□□□□□ -1.63
ATXN3-224ENST00000554040 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 IGHV7-4-1A0A0J9YVY3 117 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 OR2T8A6NH00 312 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 DFFBO76075 338 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 KBTBD11O94819 623 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 REG1AP05451 166 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 UBBP0CG47 229 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 LIMS3P0CW19 117 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 LIMS4P0CW20 117 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 GABRB1P18505 474 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 CALB2P22676 271 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 PSMD7P51665 324 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 DEFB131AP59861 70 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 YIF1BQ5BJH7 314 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 VKORC1L1Q8N0U8 176 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 PUSL1Q8N0Z8 303 aaKnown RBP4.85□□□□□ -1.63
ATXN3-224ENST00000554040 CSNK1G2-AS1Q8NCQ2 148 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 OR52I1Q8NGK6 324 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 OR4A4PQ8NGN8 299 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 VSTM2AQ8TAG5 236 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 TMEM167AQ8TBQ9 72 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 VN1R17PQ8TDU5 208 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 GIMAP1Q8WWP7 306 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 BSCL2Q96G97 398 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-224ENST00000554040 SLC29A1Q99808 456 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 C1orf43Q9BWL3 253 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 TMEM59Q9BXS4 323 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 TMEM14BQ9NUH8 114 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 MRPS18AQ9NVS2 196 aaKnown RBP4.85□□□□□ -1.63
ATXN3-224ENST00000554040 BABAM2Q9NXR7 383 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 THYN1Q9P016 225 aa4.85□□□□□ -1.63
ATXN3-224ENST00000554040 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
ATXN3-224ENST00000554040 TRBV6-7A0A0A0MS04 114 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 A0A0A6YYD4 124 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 BET1O15155 118 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 SOCS1O15524 211 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 FCGR3BO75015 233 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 SPP1P10451 314 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 CELP19835 753 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 C4BPBP20851 252 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 XGP55808 180 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 UNC119Q13432 240 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 ARFRP1Q13795 201 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 IGSF11Q5DX21 431 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 Q5VSD8 79 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 TMPRSS11AQ6ZMR5 421 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 TRPT1Q86TN4 253 aaKnown RBP4.84□□□□□ -1.63
ATXN3-224ENST00000554040 NKAIN3Q8N8D7 197 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 OR10J5Q8NHC4 309 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 FRZBQ92765 325 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 GGHQ92820 318 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 ATP6V0BQ99437 205 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 YTHDF1Q9BYJ9 559 aaKnown RBP4.84□□□□□ -1.63
ATXN3-224ENST00000554040 C12orf4Q9NQ89 552 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 ARGLU1Q9NWB6 273 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-224ENST00000554040 CLEC5AQ9NY25 188 aa4.84□□□□□ -1.63
ATXN3-224ENST00000554040 RBM7Q9Y580 266 aaKnown RBP4.84□□□□□ -1.63
ATXN3-224ENST00000554040 NACAE9PAV3 2078 aa4.84□□□□□ -1.64
ATXN3-224ENST00000554040 IGHV3-49A0A0A0MS15 119 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 TRAV14DV4A0A0A6YYC5 116 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 TMEM14DPA8MWL7 114 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 DNASE2O00115 360 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-224ENST00000554040 RAB27BO00194 218 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 FABP7O15540 132 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 DIRAS3O95661 229 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 LALBAP00709 142 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms