RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SNCAP37840 140 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 COMPP49747 757 aaPredicted RBP8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 SUB1P53999 127 aaKnown RBP eCLIP8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 ATP5IP56385 69 aaPredicted RBP8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 RAB11AP62491 216 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 PJVKQ0ZLH3 352 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 OR2F1Q13607 317 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 FXYD3Q14802 87 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 TMEM219Q86XT9 240 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 STX12Q86Y82 276 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 OR2C3Q8N628 320 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 PIFOQ8TCI5 191 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 ABHD5Q8WTS1 349 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 SRSF8Q9BRL6 282 aaKnown RBP8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 PRDM13Q9H4Q3 707 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 TPSG1Q9NRR2 321 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 PAIP2BQ9ULR5 123 aaKnown RBP8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 STRAPQ9Y3F4 350 aaKnown RBP8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 U3KQ87 197 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 ABCA2Q9BZC7 2435 aa8.34□□□□□ -1.07
TMEM55B-205ENST00000554028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.34□□□□□ -1.088e-8■■■□□ 18.1
TMEM55B-205ENST00000554028 NOTCH2Q04721 2471 aa8.34□□□□□ -1.08
TMEM55B-205ENST00000554028 A0A0D9SG52 128 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 H0YIZ8 118 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 CYB5BO43169 146 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 TSC22D2O75157 780 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 IGHV4-59P01825 116 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 HLA-DRB1P01911 266 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 RPL12P30050 165 aaKnown RBP8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 HTR2BP41595 481 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 CX3CL1P78423 397 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 SPINK9Q5DT21 86 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 SPANXN5Q5MJ07 72 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 Q8N9W7 124 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 OR11H4Q8NGC9 324 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 ZNF418Q8TF45 676 aaPredicted RBP8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 SMR3AQ99954 134 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 TNFRSF19Q9NS68 423 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 TNFSF18Q9UNG2 199 aa8.33□□□□□ -1.08
TMEM55B-205ENST00000554028 CSMD2Q7Z408 3487 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 MSGN1A6NI15 193 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 G3V3Q6 166 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 FCN1O00602 326 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 HOXA3O43365 443 aaPredicted RBP8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 TSPAN9O75954 239 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 HBG1P69891 147 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 HBG2P69892 147 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 TMEM267Q0VDI3 215 aaPredicted RBP8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 LCE2CQ5TA81 110 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 SIGLECL1Q8N7X8 197 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 C5orf56Q8N8D9 126 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 GRPEL2Q8TAA5 225 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 ARPC1AQ92747 370 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 AQP10Q96PS8 301 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 LYRM2Q9NU23 88 aaPredicted RBP8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 VPREB3Q9UKI3 123 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 HSPB11Q9Y547 144 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 ITPR3Q14573 2671 aa8.32□□□□□ -1.08
TMEM55B-205ENST00000554028 KANTRA0A1W2PQU2 76 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 FAM24AA6NFZ4 105 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 INS-IGF2F8WCM5 200 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 H3BP45 60 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 TAAR5O14804 337 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 KCNAB3O43448 404 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 IFNA4P05014 189 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 OR13C7P0DN81 318 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 MYOD1P15172 320 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 NPY1RP25929 384 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 PAX9P55771 341 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 BAXQ07812 192 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 ZNF345Q14585 488 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 C9orf152Q5JTZ5 239 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 TMEM252Q8N6L7 170 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 SLC24A4Q8NFF2 622 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 OR10P1Q8NGE3 313 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 OR1L6Q8NGR2 347 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 TMEM68Q96MH6 324 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 ZNF48Q96MX3 618 aaPredicted RBP8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
TMEM55B-205ENST00000554028 ABCA1O95477 2261 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 HKR1P10072 659 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 DEFA4P12838 97 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 S100A11P31949 105 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 SULT1A1P50225 295 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 EWSR1Q01844 656 aaKnown RBP eCLIP8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 MRGPRG-AS1Q2M3A8 158 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 LGALSLQ3ZCW2 172 aaPredicted RBP8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 FBLN7Q53RD9 439 aa8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 ARSJQ5FYB0 599 aaPredicted RBP8.3□□□□□ -1.08
TMEM55B-205ENST00000554028 TMUB2Q71RG4 321 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms