RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FOXE3Q13461 319 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 PLET1Q6UQ28 207 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 UNQ5815/PRO19632Q6UWF5 114 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 C12orf54Q6X4T0 127 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 C19orf35Q6ZS72 473 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 LCNL1Q6ZST4 164 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 TTC9CQ8N5M4 171 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 OR1L8Q8NGR8 309 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 TMEM68Q96MH6 324 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 SPIN2AQ99865 258 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 SPIN2BQ9BPZ2 258 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 SRSF8Q9BRL6 282 aaKnown RBP11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 COMMD5Q9GZQ3 224 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 CACNG5Q9UF02 275 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 DMRT1Q9Y5R6 373 aa11.58□□□□□ -0.56
MTHFD1-204ENST00000553405 NPIPB5A8MRT5 1133 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 MPTX1A8MV57 137 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 ADAP1O75689 374 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 ACTL6BO94805 426 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 SLC25A6P12236 298 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 CTRB1P17538 263 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 PRCDQ00LT1 54 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 TMEM267Q0VDI3 215 aaPredicted RBP11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 OXA1LQ15070 435 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 GGNBP1Q5YKI7 109 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 CTRB2Q6GPI1 263 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 COMMD1Q8N668 190 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 C11orf44Q8N8P7 122 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 OR4A16Q8NH70 328 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 SPATA3Q8NHX4 192 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 ABHD5Q8WTS1 349 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 GON7Q9BXV9 100 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 FKBP11Q9NYL4 201 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 TMED3Q9Y3Q3 217 aa11.57□□□□□ -0.56
MTHFD1-204ENST00000553405 C7orf66A4D0T2 115 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 INS-IGF2F8WCM5 200 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 FBXO24O75426 580 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 ELANEP08246 267 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 TRAPPC2P0DI81 140 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 TRAPPC2BP0DI82 140 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 C2orf68Q2NKX9 166 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 THOC7Q6I9Y2 204 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 TEX38Q6PEX7 206 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 OR5T1Q8NG75 326 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 OR5M8Q8NGP6 311 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 FANCD2OSQ96PS1 177 aa11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 FYTTD1Q96QD9 318 aaKnown RBP11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-204ENST00000553405 TRBV9A0A0B4J1U6 114 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 PIGBOS1A0A0B4J2F0 54 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 A0A1B0GU03 582 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 A0A1W2PN81 502 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 SNRPGP15A8MWD9 76 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 PRAF2O60831 178 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 RPLP1P05386 114 aaKnown RBP11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 HOXB5P09067 269 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 SULT1A3P0DMM9 295 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 SULT1A4P0DMN0 295 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 PSMB6P28072 239 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 CHRNA7P36544 502 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 MFAP2P55001 183 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 SLC35B1P78383 322 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 SMCO1Q147U7 214 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 COQ8AQ8NI60 647 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 PHB2Q99623 299 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
MTHFD1-204ENST00000553405 H3BUA1 57 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 RAB9AP51151 201 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 RGS21Q2M5E4 152 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 PVRIGQ6DKI7 326 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 C11orf87Q6NUJ2 197 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 SHISA2Q6UWI4 295 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 C18orf65Q6ZTR6 163 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 C12orf45Q8N5I9 185 aaPredicted RBP11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 OR2C3Q8N628 320 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 OR4X2Q8NGF9 303 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 RNASE11Q8TAA1 199 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 WNK1Q9H4A3 2382 aa11.54□□□□□ -0.56
MTHFD1-204ENST00000553405 PRH1P02810 166 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 REG1AP05451 166 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 OR13C7P0DN81 318 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 SPCS3P61009 180 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 RPL23AP62750 156 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 BSXQ3C1V8 233 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 HSD17B13Q7Z5P4 300 aaPredicted RBP11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 DNAH3Q8TD57 4116 aa11.53□□□□□ -0.56
MTHFD1-204ENST00000553405 IGLV11-55A0A075B6I3 123 aa11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 IL15RAQ13261 267 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms