RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 THOC7Q6I9Y2 204 aaKnown RBP11.03□□□□□ -0.64
CACNB3-220ENST00000551716 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
CACNB3-220ENST00000551716 HRASLSQ9HDD0 168 aa11.03□□□□□ -0.64
CACNB3-220ENST00000551716 C21orf62Q9NYP8 219 aa11.03□□□□□ -0.64
CACNB3-220ENST00000551716 KCNK7Q9Y2U2 307 aa11.03□□□□□ -0.64
CACNB3-220ENST00000551716 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-220ENST00000551716 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 TRAV14DV4A0A0A6YYC5 116 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 CGB1A6NKQ9 187 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 DNASE2O00115 360 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-220ENST00000551716 ATP5HO75947 161 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 FGF2P09038 288 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 GADD45AP24522 165 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 PLA2G7Q13093 441 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 SLC25A24Q6NUK1 477 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 ZNF66Q6ZN08 573 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 GBGT1Q8N5D6 347 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 DGCR14Q96DF8 476 aaKnown RBP11.02□□□□□ -0.65
CACNB3-220ENST00000551716 RAB22AQ9UL26 194 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 TBC1D24Q9ULP9 559 aa11.02□□□□□ -0.65
CACNB3-220ENST00000551716 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 J3QRK9 145 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 DEFB131AP59861 70 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 C2orf76Q3KRA6 126 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 C10orf67Q8IYJ2 551 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 MFSD4AQ8N468 514 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 DUSP18Q8NEJ0 188 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 MAFIPQ8WZ33 124 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 FAM3DQ96BQ1 224 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 OR10C1Q96KK4 312 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 QTRT1Q9BXR0 403 aaKnown RBP11.01□□□□□ -0.65
CACNB3-220ENST00000551716 TMEM14BQ9NUH8 114 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 SPATA2Q9UM82 520 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 X6R8D5 127 aa11.01□□□□□ -0.65
CACNB3-220ENST00000551716 NUPL2O15504 423 aaKnown RBP11□□□□□ -0.65
CACNB3-220ENST00000551716 YIF1AO95070 293 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 IGLV2-14P01704 120 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 SERPINE2P07093 398 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 GIG44P09565 113 aaPredicted RBP11□□□□□ -0.65
CACNB3-220ENST00000551716 UCHL1P09936 223 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 TIMM50Q3ZCQ8 353 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 Q56UQ5 140 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 LEMD1Q68G75 181 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 TCF24Q7RTU0 167 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 NANOGP1Q8N7R0 232 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 SCARB1Q8WTV0 552 aa11□□□□□ -0.65
CACNB3-220ENST00000551716 EIF4EP06730 217 aaKnown RBP10.99□□□□□ -0.65
CACNB3-220ENST00000551716 CTSGP08311 255 aa10.99□□□□□ -0.65
CACNB3-220ENST00000551716 OR13C7P0DN81 318 aa10.99□□□□□ -0.65
CACNB3-220ENST00000551716 BRWD1-AS2P59051 145 aa10.99□□□□□ -0.65
CACNB3-220ENST00000551716 ZNF367Q7RTV3 350 aa10.99□□□□□ -0.65
CACNB3-220ENST00000551716 OR10R2Q8NGX6 335 aa10.99□□□□□ -0.65
CACNB3-220ENST00000551716 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
CACNB3-220ENST00000551716 UPK2O00526 184 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 TRAPPC2P0DI81 140 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 TRAPPC2BP0DI82 140 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 GNB3P16520 340 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
CACNB3-220ENST00000551716 TAS2R31P59538 309 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 EIF4EBP1Q13541 118 aaPredicted RBP10.98□□□□□ -0.65
CACNB3-220ENST00000551716 ARL6IP1Q15041 203 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 TRPT1Q86TN4 253 aaKnown RBP10.98□□□□□ -0.65
CACNB3-220ENST00000551716 GINS3Q9BRX5 216 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 RNF167Q9H6Y7 350 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 TAS2R8Q9NYW2 309 aa10.98□□□□□ -0.65
CACNB3-220ENST00000551716 AK6Q9Y3D8 172 aaKnown RBP10.98□□□□□ -0.65
CACNB3-220ENST00000551716 LRP1BQ9NZR2 4599 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 IGHV3-49A0A0A0MS15 119 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
CACNB3-220ENST00000551716 MFNGO00587 321 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.65
CACNB3-220ENST00000551716 HIST1H1DP16402 221 aaKnown RBP10.97□□□□□ -0.65
CACNB3-220ENST00000551716 NFYAP23511 347 aaPredicted RBP10.97□□□□□ -0.65
CACNB3-220ENST00000551716 DTYMKP23919 212 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
CACNB3-220ENST00000551716 ZNF767PQ75MW2 155 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 TXN2Q99757 166 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 CELA1Q9UNI1 258 aa10.97□□□□□ -0.65
CACNB3-220ENST00000551716 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
CACNB3-220ENST00000551716 A0A075B6Q4 140 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 ST8SIA3O43173 380 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 ARL6IP5O75915 188 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 NQO2P16083 231 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 CLDN12P56749 244 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 TNP2Q05952 138 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 MSMO1Q15800 293 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 POU2AF1Q16633 256 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 SPAG16Q8N0X2 631 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 OR1L8Q8NGR8 309 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 ZNF414Q96IQ9 312 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 GFI1Q99684 422 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 TMEM231Q9H6L2 316 aa10.96□□□□□ -0.65
CACNB3-220ENST00000551716 IGKV1D-8A0A087WSZ0 117 aa10.95□□□□□ -0.66
CACNB3-220ENST00000551716 IGHV3-21A0A0B4J1V1 117 aa10.95□□□□□ -0.66
CACNB3-220ENST00000551716 TMEM272A0A1B0GTI8 110 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms