RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 CALRP27797 417 aaKnown RBP8.59□□□□□ -1.03
PTCH1-222ENST00000551425 PSMD7P51665 324 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 TNP2Q05952 138 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 C12orf74Q32Q52 190 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 IGSF11Q5DX21 431 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 C22orf42Q6IC83 251 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 VKORC1L1Q8N0U8 176 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 FAM89BQ8N5H3 189 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 OR6M1Q8NGM8 313 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 OR2A7Q96R45 310 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 RNF2Q99496 336 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 DCUN1D5Q9BTE7 237 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 FUNDC2Q9BWH2 189 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 LPAR5Q9H1C0 372 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 KCNK15Q9H427 330 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
PTCH1-222ENST00000551425 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 PDCD5O14737 125 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 FCGR3BO75015 233 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 REG1AP05451 166 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-222ENST00000551425 RANBP1P43487 201 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 TFPI2P48307 235 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 TMEM41BQ5BJD5 291 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 LRRTM1Q86UE6 522 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 UBE2DNLQ8IWF7 75 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 PUSL1Q8N0Z8 303 aaKnown RBP8.58□□□□□ -1.04
PTCH1-222ENST00000551425 VN1R17PQ8TDU5 208 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 BSCL2Q96G97 398 aaPredicted RBP8.58□□□□□ -1.04
PTCH1-222ENST00000551425 CMSS1Q9BQ75 279 aaKnown RBP8.58□□□□□ -1.04
PTCH1-222ENST00000551425 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 SCRT1Q9BWW7 348 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 THYN1Q9P016 225 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 RBM7Q9Y580 266 aaKnown RBP8.58□□□□□ -1.04
PTCH1-222ENST00000551425 X6R8D5 127 aa8.58□□□□□ -1.04
PTCH1-222ENST00000551425 CGB1A6NKQ9 187 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 BPNT1O95861 308 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 TMEM50BP56557 158 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 RNF212Q495C1 297 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 GPR107Q5VW38 600 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 SPSB3Q6PJ21 355 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 URM1Q9BTM9 101 aaKnown RBP8.57□□□□□ -1.04
PTCH1-222ENST00000551425 CENPOQ9BU64 300 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 PRELID3BQ9Y3B1 194 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
PTCH1-222ENST00000551425 IGHV3OR16-8A0A075B7F1 116 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 OR2T8A6NH00 312 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 CHEK1O14757 476 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 ZNF207O43670 478 aaKnown RBP8.56□□□□□ -1.04
PTCH1-222ENST00000551425 NOL3O60936 208 aaKnown RBP8.56□□□□□ -1.04
PTCH1-222ENST00000551425 DFFBO76075 338 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 CD37P11049 281 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 RAB3BP20337 219 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 FAM90A2PQ658T7 463 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-222ENST00000551425 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 KCTD9Q7L273 389 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 CLVS1Q8IUQ0 354 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-222ENST00000551425 ARHGAP5-AS1Q96IT6 56 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 RHPN1-AS1Q9BWJ2 59 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 PECRQ9BY49 303 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 MRPS7Q9Y2R9 242 aaKnown RBP8.56□□□□□ -1.04
PTCH1-222ENST00000551425 AK6Q9Y3D8 172 aaKnown RBP8.56□□□□□ -1.04
PTCH1-222ENST00000551425 V9GY05 133 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
PTCH1-222ENST00000551425 IGHV7-4-1A0A0J9YVY3 117 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 GABARAPO95166 117 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 HLA-GP17693 338 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 TMBIM6P55061 237 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 LSM3P62310 102 aaKnown RBP8.55□□□□□ -1.04
PTCH1-222ENST00000551425 RPL8P62917 257 aaKnown RBP8.55□□□□□ -1.04
PTCH1-222ENST00000551425 H1FOOQ8IZA3 346 aaPredicted RBP8.55□□□□□ -1.04
PTCH1-222ENST00000551425 OR4S2Q8NH73 311 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 RAB2BQ8WUD1 216 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 FAM210BQ96KR6 192 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 CMTM3Q96MX0 182 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 BCL7BQ9BQE9 202 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 RNF167Q9H6Y7 350 aa8.55□□□□□ -1.04
PTCH1-222ENST00000551425 IGKV3-7A0A075B6H7 116 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 EPM2AB3EWF7 344 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 INAFM2P0DMQ5 153 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 SPP1P10451 314 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 NPY1RP25929 384 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 SDC2P34741 201 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 DEFB131AP59861 70 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 OR2B8PP59922 312 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 VBP1P61758 197 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 RPL30P62888 115 aaKnown RBP8.54□□□□□ -1.04
PTCH1-222ENST00000551425 PAFAH1B2P68402 229 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 CTF1Q16619 201 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 OR2B11Q5JQS5 317 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 PLAC9Q5JTB6 97 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 LEMD1Q68G75 181 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 STHQ8IWL8 128 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 GBGT1Q8N5D6 347 aa8.54□□□□□ -1.04
PTCH1-222ENST00000551425 TMEM116Q8NCL8 245 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms