RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 IGLV11-55A0A075B6I3 123 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 IGHV3-66A0A0C4DH42 116 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 IGLC7A0M8Q6 106 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 NPIPB5A8MRT5 1133 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 LGALS9O00182 355 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 CASQ2O14958 399 aaPredicted RBP5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 ARL6IP5O75915 188 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 HLA-DQB1P01920 261 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 ZNF735P0CB33 412 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 RRASP10301 218 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 HLA-GP17693 338 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 OR2B8PP59922 312 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 MXD1Q05195 221 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 MLLT11Q13015 90 aaPredicted RBP5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 OR4A47Q6IF82 309 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 RBPMS2Q6ZRY4 209 aaKnown RBP5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 GPHB5Q86YW7 130 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 UBAC2Q8NBM4 344 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 OR1L6Q8NGR2 347 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 OR2K2Q8NGT1 345 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 OR51H1Q8NH63 302 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 ZNF502Q8TBZ5 544 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 LGALS14Q8TCE9 139 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 PHLDA1Q8WV24 401 aaPredicted RBP5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 RAB24Q969Q5 203 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 EEF1AKMT3Q96AZ1 226 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 CNBD2Q96M20 576 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 DUSP21Q9H596 190 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 TECRQ9NZ01 308 aaKnown RBP5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 ZNF257Q9Y2Q1 563 aa5.04□□□□□ -1.6
PRPF40B-214ENST00000551320 CRYGCP07315 174 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 CTSDP07339 412 aaPredicted RBP5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 OR13C7P0DN81 318 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 RAB3BP20337 219 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 GADD45AP24522 165 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 FCGR2CP31995 323 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 TGFBR1P36897 503 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 RPL8P62917 257 aaKnown RBP5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 WT1-ASQ06250 92 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 TIMM50Q3ZCQ8 353 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 FAM106AQ4KMX7 169 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 SPINK9Q5DT21 86 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 HACD4Q5VWC8 232 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 SLC25A24Q6NUK1 477 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 PLET1Q6UQ28 207 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 TMEM17Q86X19 198 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 LAX1Q8IWV1 398 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 SPAG16Q8N0X2 631 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 OR2C3Q8N628 320 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 OR4S2Q8NH73 311 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 GIMAP1Q8WWP7 306 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 ADTRPQ96IZ2 230 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 SCRT1Q9BWW7 348 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 SLC5A7Q9GZV3 580 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 DAPK2Q9UIK4 370 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 PRELID3BQ9Y3B1 194 aa5.03□□□□□ -1.6
PRPF40B-214ENST00000551320 AGRNO00468 2067 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 TRAV18A0A075B6X5 111 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 TEX50A0A1B0GTY4 177 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 A8MWP6 167 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 UPK2O00526 184 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 XRCC3O43542 346 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 APOHP02749 345 aaPredicted RBP5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 C8orf88P0DMB2 117 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 CD36P16671 472 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 HOXA5P20719 270 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 RPS19P39019 145 aaKnown RBP5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 GNG2P59768 71 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 IZUMO4Q1ZYL8 232 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 ZNF818PQ6ZRF7 136 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 ZNF767PQ75MW2 155 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 FAM24BQ8N5W8 94 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 OR13F1Q8NGS4 319 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 RNF183Q96D59 192 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 RNF2Q99496 336 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 ACOT13Q9NPJ3 140 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 ANXA10Q9UJ72 324 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 MRPS7Q9Y2R9 242 aaKnown RBP5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 RRP15Q9Y3B9 282 aaKnown RBP5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 TPRKBQ9Y3C4 175 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 PKD1P98161 4303 aa5.02□□□□□ -1.61
PRPF40B-214ENST00000551320 DYNC1H1Q14204 4646 aaKnown RBP5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 TRAV1-2A0A0B4J238 106 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 METTL21EPA6NDL7 271 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 NUPR2A6NF83 97 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 PDCD5O14737 125 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 TGOLN2O43493 480 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 MYL9P24844 172 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 PSMB9P28065 219 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 G6PCP35575 357 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 RFX2P48378 723 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 ARPC4P59998 168 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 CNIH2Q6PI25 160 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 PRSS48Q7RTY5 328 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 SLC25A42Q86VD7 318 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 BEST4Q8NFU0 473 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 DMBX1Q8NFW5 382 aa5.01□□□□□ -1.61
PRPF40B-214ENST00000551320 CD300LFQ8TDQ1 290 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms