RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 TIMM23O14925 209 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 MPDU1O75352 247 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 CRYGBP07316 175 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 NPY1RP25929 384 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 BPIFB3P59826 476 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 DLK1P80370 383 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 TMEM267Q0VDI3 215 aaPredicted RBP10.12□□□□□ -0.79
CACNB3-217ENST00000550483 KLRD1Q13241 179 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 EBI3Q14213 229 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 PSG5Q15238 335 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 PRSS8Q16651 343 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 VWC2Q2TAL6 325 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 NPBQ8NG41 125 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 TMED6Q8WW62 240 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 CFHR4Q92496 578 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 OR4C12Q96R67 309 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 WFDC1Q9HC57 220 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 NDUFA4L2Q9NRX3 87 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 UQCC1Q9NVA1 299 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 TIMM9Q9Y5J7 89 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 AUP1Q9Y679 476 aa10.12□□□□□ -0.79
CACNB3-217ENST00000550483 YLPM1P49750 1951 aaKnown RBP10.12□□□□□ -0.79
CACNB3-217ENST00000550483 USF3Q68DE3 2245 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 COL6A5A8TX70 2615 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
CACNB3-217ENST00000550483 TEX50A0A1B0GTY4 177 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 PMS2P5A8MQ11 134 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 NPFFO15130 113 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 SLC25A17O43808 307 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 NDUFA3O95167 84 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 SNRNP70P08621 437 aaKnown RBP10.11□□□□□ -0.79
CACNB3-217ENST00000550483 FAM106CPP0CH98 169 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 SERF2P84101 59 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 LRRC75BQ2VPJ9 315 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 C2orf83Q53S99 150 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 ETV3LQ6ZN32 361 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 PPP1R27Q86WC6 154 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 PARP11Q9NR21 331 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 SIGLEC9Q9Y336 463 aa10.11□□□□□ -0.79
CACNB3-217ENST00000550483 DOCK11Q5JSL3 2073 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 C17orf112F2Z3M2 114 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 RRHO14718 337 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 NBR2O15453 112 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 SNCAP37840 140 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 BSXQ3C1V8 233 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 OR8G2PQ6IF36 304 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
CACNB3-217ENST00000550483 WDR61Q9GZS3 305 aaKnown RBP10.1□□□□□ -0.79
CACNB3-217ENST00000550483 ZNF430Q9H8G1 570 aaPredicted RBP10.1□□□□□ -0.79
CACNB3-217ENST00000550483 METTL1Q9UBP6 276 aaKnown RBP10.1□□□□□ -0.79
CACNB3-217ENST00000550483 HILPDAQ9Y5L2 63 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 VPS13CQ709C8 3753 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 STAB1Q9NY15 2570 aa10.1□□□□□ -0.79
CACNB3-217ENST00000550483 IGHV3-72A0A0B4J1Y9 119 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 IGHV1-69DA0A0B4J2H0 117 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 ZNF705EA8MWA4 302 aaPredicted RBP10.09□□□□□ -0.79
CACNB3-217ENST00000550483 CORTO00230 105 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 IGHV1-69P01742 117 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 MBP02144 154 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 IFNA4P05014 189 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 FAM157CP0CG43 387 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 ATP6V0CP27449 155 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 RPL27AP46776 148 aaKnown RBP10.09□□□□□ -0.79
CACNB3-217ENST00000550483 DLX1P56177 255 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 PLGLAQ15195 96 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 MMDQ15546 238 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 SSX2Q16385 188 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 CLEC9AQ6UXN8 241 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 LHFPL4Q7Z7J7 247 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 CENPVQ7Z7K6 275 aaPredicted RBP10.09□□□□□ -0.79
CACNB3-217ENST00000550483 HAPLN4Q86UW8 402 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
CACNB3-217ENST00000550483 COMMD1Q8N668 190 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 TEX29Q8N6K0 151 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 ZNF114Q8NC26 417 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 OR1L6Q8NGR2 347 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 RNASEH2CQ8TDP1 164 aaKnown RBP10.09□□□□□ -0.79
CACNB3-217ENST00000550483 CACNG8Q8WXS5 425 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 HINT2Q9BX68 163 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 GSX1Q9H4S2 264 aaPredicted RBP10.09□□□□□ -0.79
CACNB3-217ENST00000550483 FBXO7Q9Y3I1 522 aa10.09□□□□□ -0.79
CACNB3-217ENST00000550483 CSPG4Q6UVK1 2322 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 A0A096LNT2 108 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 CENPVL3A0A0U1RRI6 287 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 TEX46H3BTG2 121 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 FBXO24O75426 580 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 IGKV1D-33P01593 117 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 IGKV1-33P01594 117 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 CD99P14209 185 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 SAA4P35542 130 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 GPX4P36969 197 aaPredicted RBP10.08□□□□□ -0.8
CACNB3-217ENST00000550483 RAB2AP61019 212 aa10.08□□□□□ -0.8
CACNB3-217ENST00000550483 RAB31Q13636 194 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms