RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SPSB3Q6PJ21 355 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 STPG3Q8N7X2 389 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 GIMAP1Q8WWP7 306 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 BSCL2Q96G97 398 aaPredicted RBP17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 TMEM140Q9NV12 185 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 IGLC7A0M8Q6 106 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 CGB1A6NKQ9 187 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 TSPAN4O14817 238 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 SDC2P34741 201 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 HERV-K104P61576 105 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 TNFRSF9Q07011 255 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 GVQW1Q8N7I0 195 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 OR51H1Q8NH63 302 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 ATP6V0BQ99437 205 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 C6orf62Q9GZU0 229 aaPredicted RBP17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 COMMD9Q9P000 198 aa17.2■□□□□ 0.34
SMARCD1-209ENST00000550477 KIR2DL5BA0A0G2JN68 375 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 KIR2DL5BA0A0G2JPC4 375 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 A0A0J9YWU9 116 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 SERPINE2P07093 398 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 OR13C7P0DN81 318 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 MXD1Q05195 221 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 IDNKQ5T6J7 187 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 LYG2Q86SG7 212 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 SPARTQ8N0X7 666 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 KIR2DL5AQ8N109 375 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 GDPD1Q8N9F7 314 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 OR5AP2Q8NGF4 316 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 OR1L8Q8NGR8 309 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 KIR2DL5BQ8NHK3 375 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 TMEM190Q8WZ59 177 aa17.19■□□□□ 0.34
SMARCD1-209ENST00000550477 OR2T8A6NH00 312 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 OR4C46A6NHA9 309 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 NDUFA4O00483 81 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 ATF4P18848 351 aaPredicted RBP17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 TMEM17Q86X19 198 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 TSPAN14Q8NG11 270 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 Q9H521 79 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 UBQLN2Q9UHD9 624 aa17.18■□□□□ 0.34
SMARCD1-209ENST00000550477 TRAV3A0A0B4J244 114 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 TMEM127O75204 238 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 SNAPC5O75971 98 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 PTHLHP12272 177 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 CMC4P56277 68 aaPredicted RBP17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 DEFB135Q30KP9 77 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 CEMP1Q6PRD7 247 aaPredicted RBP17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 ZNF818PQ6ZRF7 136 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 C20orf24Q9BUV8 137 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 YTHDF1Q9BYJ9 559 aaKnown RBP17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 IFT46Q9NQC8 304 aa17.17■□□□□ 0.34
SMARCD1-209ENST00000550477 RPA2P15927 270 aa17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 OR10W1Q8NGF6 305 aa17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 LSM10Q969L4 123 aaKnown RBP17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 GALNT14Q96FL9 552 aa17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 HINT2Q9BX68 163 aa17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 AUNIPQ9H7T9 357 aa17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 C21orf62Q9NYP8 219 aa17.16■□□□□ 0.34
SMARCD1-209ENST00000550477 TEX50A0A1B0GTY4 177 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 K7EMT4 169 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 S1PR2O95136 353 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 CMTM1Q8IZ96 169 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 OR5H6Q8NGV6 325 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 RNF183Q96D59 192 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 TMEM56Q96MV1 263 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 FKBP11Q9NYL4 201 aa17.15■□□□□ 0.34
SMARCD1-209ENST00000550477 MARCH11A6NNE9 402 aa17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 F2RP25116 425 aa17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 Q56UQ5 140 aa17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 UBAC2Q8NBM4 344 aa17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 SLC25A38Q96DW6 304 aa17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 S100A16Q96FQ6 103 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 EHFQ9NZC4 300 aa17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 F11RQ9Y624 299 aaKnown RBP17.14■□□□□ 0.33
SMARCD1-209ENST00000550477 LOC100506127A0A0U1RQW1 187 aa17.13■□□□□ 0.33
SMARCD1-209ENST00000550477 FCER2P06734 321 aa17.13■□□□□ 0.33
SMARCD1-209ENST00000550477 GNRHRP30968 328 aa17.13■□□□□ 0.33
SMARCD1-209ENST00000550477 ZNF773Q6PK81 442 aa17.13■□□□□ 0.33
SMARCD1-209ENST00000550477 SCARB1Q8WTV0 552 aa17.13■□□□□ 0.33
SMARCD1-209ENST00000550477 OR51B2Q9Y5P1 312 aa17.13■□□□□ 0.33
SMARCD1-209ENST00000550477 C15orf62A8K5M9 175 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 S100GP29377 79 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 RELQ04864 619 aaPredicted RBP17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 WT1-ASQ06250 92 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 DHRS11Q6UWP2 260 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 CROCCP3Q8IVE0 287 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 CADM3Q8N126 398 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 CMTM3Q96MX0 182 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 TSC22D3Q99576 134 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 NDUFA4L2Q9NRX3 87 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 PRNDQ9UKY0 176 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 HYDINQ4G0P3 5121 aa17.12■□□□□ 0.33
SMARCD1-209ENST00000550477 NUPL2O15504 423 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-209ENST00000550477 KRASP01116 189 aa17.11■□□□□ 0.33
SMARCD1-209ENST00000550477 CLEC2LP0C7M8 214 aa17.11■□□□□ 0.33
SMARCD1-209ENST00000550477 RPL35AP18077 110 aaKnown RBP17.11■□□□□ 0.33
SMARCD1-209ENST00000550477 OR5B3Q8NH48 314 aa17.11■□□□□ 0.33
SMARCD1-209ENST00000550477 ZNF2Q9BSG1 426 aaPredicted RBP17.11■□□□□ 0.33
SMARCD1-209ENST00000550477 IGHV3-21A0A0B4J1V1 117 aa17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 XRCC3O43542 346 aa17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 PGLYRP1O75594 196 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms