RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PMP2P02689 132 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 FCER2P06734 321 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 SERPINE2P07093 398 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 TSPAN5P62079 268 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 SPSB3Q6PJ21 355 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 GDPD1Q8N9F7 314 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 UXS1Q8NBZ7 420 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR5B3Q8NH48 314 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 LSM10Q969L4 123 aaKnown RBP8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 TMEM56Q96MV1 263 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 GAR1Q9NY12 217 aaKnown RBP8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 MRPL27Q9P0M9 148 aaKnown RBP8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 PRNDQ9UKY0 176 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 TRAV3A0A0B4J244 114 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 TEX50A0A1B0GTY4 177 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 TMEM213A2RRL7 107 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 S1PR2O95136 353 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 IGHV3-23P01764 117 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 RLN1P04808 185 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 REG1AP05451 166 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 C8orf88P0DMB2 117 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR13C7P0DN81 318 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 LPAR6P43657 344 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 LSM3P62310 102 aaKnown RBP8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 SLC25A24Q6NUK1 477 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 LYSMD2Q8IV50 215 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZNF502Q8TBZ5 544 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 GPX8Q8TED1 209 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 C15orf40Q8WUR7 153 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 BSCL2Q96G97 398 aaPredicted RBP8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 PLEKHA3Q9HB20 300 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 NDUFA4L2Q9NRX3 87 aa8.2□□□□□ -1.1
VTI1BP3-201ENST00000550220 DNAH7Q8WXX0 4024 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 MFSD2BA6NFX1 497 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 KRASP01116 189 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 CD7P09564 240 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 HLA-DMAP28067 261 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 GPR183P32249 361 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 RCVRNP35243 200 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 HRH1P35367 487 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 RORCP51449 518 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 UCP3P55916 312 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 LAMTOR1Q6IAA8 161 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 MZT2AQ6P582 158 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 C19orf35Q6ZS72 473 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 SLC38A6Q8IZM9 456 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR52B4Q8NGK2 314 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 FCAMRQ8WWV6 532 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 AP3S1Q92572 193 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 WDR89Q96FK6 387 aaPredicted RBP8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZNF436Q9C0F3 470 aaPredicted RBP8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 HIPK2Q9H2X6 1198 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 C5orf66Q9H5L9 145 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 COMMD3Q9UBI1 195 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR51B2Q9Y5P1 312 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 F11RQ9Y624 299 aaKnown RBP8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 S4R3C0 116 aa8.19□□□□□ -1.1
VTI1BP3-201ENST00000550220 TGOLN2O43493 480 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 TGFBR1P36897 503 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 WT1-ASQ06250 92 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 TMEM61Q8N0U2 210 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR10W1Q8NGF6 305 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 SPAG8Q99932 426 aaPredicted RBP8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 FUNDC2Q9BWH2 189 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 DAZ1Q9NQZ3 744 aaKnown RBP8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 C21orf62Q9NYP8 219 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 MLXQ9UH92 298 aa8.18□□□□□ -1.1
VTI1BP3-201ENST00000550220 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 K7EMT4 169 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 NDUFA4O00483 81 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 ATG12O94817 140 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 EIF4EP06730 217 aaKnown RBP8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 RPA2P15927 270 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 TBPP20226 339 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 G6PCP35575 357 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 TM4SF20Q53R12 229 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 DMRTA1Q5VZB9 504 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 UNQ9165/PRO28630Q6UXU0 137 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 H2BFWTQ7Z2G1 175 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR2C3Q8N628 320 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR1P1Q8NH06 330 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR4A16Q8NH70 328 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 TMEM190Q8WZ59 177 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 ZNF486Q96H40 463 aaPredicted RBP8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 TXN2Q99757 166 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 TMEM14BQ9NUH8 114 aa8.17□□□□□ -1.1
VTI1BP3-201ENST00000550220 LOC102724200A0A096LPH7 203 aaPredicted RBP8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 LCE6AA0A183 80 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR2T8A6NH00 312 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 C15orf61A6NNL5 157 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 TSPAN4O14817 238 aa8.16□□□□□ -1.1
VTI1BP3-201ENST00000550220 SCAF4O95104 1147 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms