RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 C1orf159Q96HA4 380 aa16.91■□□□□ 0.3
RITA1-201ENST00000548278 COMMD5Q9GZQ3 224 aa16.91■□□□□ 0.3
RITA1-201ENST00000548278 SLC39A9Q9NUM3 307 aa16.91■□□□□ 0.3
RITA1-201ENST00000548278 GNG13Q9P2W3 67 aa16.91■□□□□ 0.3
RITA1-201ENST00000548278 IGHV3-72A0A0B4J1Y9 119 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 EIF3GO75821 320 aaKnown RBP eCLIP16.9■□□□□ 0.3
RITA1-201ENST00000548278 HSPB1P04792 205 aaKnown RBP16.9■□□□□ 0.3
RITA1-201ENST00000548278 TMEM88Q6PEY1 159 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 OR1L8Q8NGR8 309 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 RXFP4Q8TDU9 374 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 MGST2Q99735 147 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 LSM4Q9Y4Z0 139 aaKnown RBP16.9■□□□□ 0.3
RITA1-201ENST00000548278 LGALS7P47929 136 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 ATP5IP56385 69 aaPredicted RBP16.9■□□□□ 0.3
RITA1-201ENST00000548278 PNKDQ8N490 385 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 OR10W1Q8NGF6 305 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 NPVFQ9HCQ7 196 aa16.9■□□□□ 0.3
RITA1-201ENST00000548278 LOC105371242A0A075B767 164 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 IGHV1-3A0A0C4DH29 117 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 CTXND1A0A1B0GTU2 59 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 E7EUB6 86 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 LY6LH3BQJ8 138 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 GPR6P46095 362 aaPredicted RBP16.89■□□□□ 0.29
RITA1-201ENST00000548278 VMA21Q3ZAQ7 101 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 SOHLH1Q5JUK2 328 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 ZNF430Q9H8G1 570 aaPredicted RBP16.89■□□□□ 0.29
RITA1-201ENST00000548278 SLC25A22Q9H936 323 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 INSIG2Q9Y5U4 225 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 INS-IGF2F8WCM5 200 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 ENSAO43768 121 aaKnown RBP16.89■□□□□ 0.29
RITA1-201ENST00000548278 BCL2P10415 239 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 OPRK1P41145 380 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 EFNA4P52798 201 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 ARF6P62330 175 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 PMS2P11Q13670 270 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 C2orf83Q53S99 150 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 CBLN2Q8IUK8 224 aa16.89■□□□□ 0.29
RITA1-201ENST00000548278 ACTR3CQ9C0K3 210 aaPredicted RBP16.89■□□□□ 0.29
RITA1-201ENST00000548278 AMMECR1Q9Y4X0 333 aaPredicted RBP16.89■□□□□ 0.29
RITA1-201ENST00000548278 CGB1A6NKQ9 187 aa16.88■□□□□ 0.29
RITA1-201ENST00000548278 FNDC10F2Z333 226 aa16.88■□□□□ 0.29
RITA1-201ENST00000548278 SLC25A17O43808 307 aa16.88■□□□□ 0.29
RITA1-201ENST00000548278 SOX15O60248 233 aa16.88■□□□□ 0.29
RITA1-201ENST00000548278 RNASE2P10153 161 aaKnown RBP16.88■□□□□ 0.29
RITA1-201ENST00000548278 MRGPRG-AS1Q2M3A8 158 aa16.88■□□□□ 0.29
RITA1-201ENST00000548278 ACOT6Q3I5F7 207 aaPredicted RBP16.88■□□□□ 0.29
RITA1-201ENST00000548278 GGTLC1Q9BX51 225 aa16.88■□□□□ 0.29
RITA1-201ENST00000548278 ZFP92A6NM28 416 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 M0R1W7 72 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 FBP1P09467 338 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 FAM122CQ6P4D5 195 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 TPSG1Q9NRR2 321 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 YIF1AO95070 293 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 MOB3BQ86TA1 216 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 RAB24Q969Q5 203 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 RPEQ96AT9 228 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 SIRT7Q9NRC8 400 aa16.87■□□□□ 0.29
RITA1-201ENST00000548278 CACNA1BQ00975 2339 aa16.86■□□□□ 0.29
RITA1-201ENST00000548278 HMGB3O15347 200 aaKnown RBP16.86■□□□□ 0.29
RITA1-201ENST00000548278 GCSAMLQ5JQS6 135 aa16.86■□□□□ 0.29
RITA1-201ENST00000548278 C10orf55Q5SWW7 151 aa16.86■□□□□ 0.29
RITA1-201ENST00000548278 LDLRAD2Q5SZI1 272 aa16.86■□□□□ 0.29
RITA1-201ENST00000548278 CYB561D1Q8N8Q1 229 aa16.86■□□□□ 0.29
RITA1-201ENST00000548278 OR11H6Q8NGC7 330 aa16.86■□□□□ 0.29
RITA1-201ENST00000548278 UNKLQ9H9P5 680 aaKnown RBP16.86■□□□□ 0.29
RITA1-201ENST00000548278 SEC14L6B5MCN3 397 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 CYB5BO43169 146 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 DEFA4P12838 97 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 TEPPQ6URK8 271 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 TEX45Q8NA69 505 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 A0A1W2PN81 502 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 CRYGBP07316 175 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 CHRNA7P36544 502 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 ERHP84090 104 aaKnown RBP16.85■□□□□ 0.29
RITA1-201ENST00000548278 AWAT1Q58HT5 328 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 MIC13Q5XKP0 118 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 PXMP4Q9Y6I8 212 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 USP24Q9UPU5 2620 aa16.85■□□□□ 0.29
RITA1-201ENST00000548278 PRTN3P24158 256 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 WT1-ASQ06250 92 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 HCP5Q6MZN7 132 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 TMPRSS5Q9H3S3 457 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 PLXNB1O43157 2135 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 A0A1W2PPI3 338 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 OVOL3O00110 214 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 CNTFRP26992 372 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 CDC34P49427 236 aaPredicted RBP16.84■□□□□ 0.29
RITA1-201ENST00000548278 VAX2Q9UIW0 290 aa16.84■□□□□ 0.29
RITA1-201ENST00000548278 AKAP6Q13023 2319 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 IFNA1P01562 189 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 ZFP36P26651 326 aaKnown RBP16.83■□□□□ 0.28
RITA1-201ENST00000548278 PSG5Q15238 335 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 TPTE2P1Q5T6R2 138 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 C20orf24Q9BUV8 137 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 KCNIP2Q9NS61 270 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 TACC2O95359 2948 aa16.83■□□□□ 0.28
RITA1-201ENST00000548278 C7orf77A4D0Y5 90 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 M0R036 132 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 IGHV2-5P01817 119 aa16.82■□□□□ 0.28
RITA1-201ENST00000548278 CTRB1P17538 263 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms