RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LRRC75A-AS1Q8N1F1 130 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 OR1L6Q8NGR2 347 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 RNASEH2CQ8TDP1 164 aaKnown RBP10.84□□□□□ -0.67
PTCH1-215ENST00000547672 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
PTCH1-215ENST00000547672 SH3BGRL3Q9H299 93 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-215ENST00000547672 SIGLEC9Q9Y336 463 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 UBE2L5PA0A1B0GUS4 154 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 B4DSR2 109 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 CORTO00230 105 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 TIMM23O14925 209 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 CYB5BO43169 146 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 VENTXO95231 258 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 CA2P00918 260 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 CRYGBP07316 175 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-215ENST00000547672 ZP3P21754 424 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 RPL27AP46776 148 aaKnown RBP10.83□□□□□ -0.68
PTCH1-215ENST00000547672 PAX8Q06710 450 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTCH1-215ENST00000547672 ACOT6Q3I5F7 207 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-215ENST00000547672 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 HCP5Q6MZN7 132 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 NPBQ8NG41 125 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 METTL1Q9UBP6 276 aaKnown RBP10.83□□□□□ -0.68
PTCH1-215ENST00000547672 WDR83OSQ9Y284 106 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
PTCH1-215ENST00000547672 TRAV20A0A0B4J274 112 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 A0A1B0GW64 132 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 RNASEK-C17orf49H0YIS7 233 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 RRHO14718 337 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 TAGLN2P37802 199 aaKnown RBP10.82□□□□□ -0.68
PTCH1-215ENST00000547672 BSXQ3C1V8 233 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 ZNF787Q6DD87 383 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 TEPPQ6URK8 271 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 PERPQ96FX8 193 aa10.82□□□□□ -0.68
PTCH1-215ENST00000547672 IGHV3-72A0A0B4J1Y9 119 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 A1L4Q6 167 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 SMCO3A2RU48 225 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 NBR2O15453 112 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 MDKP21741 143 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-215ENST00000547672 OPRK1P41145 380 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 EBI3Q14213 229 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 SSX2Q16385 188 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 CLEC12BQ2HXU8 276 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 MBD3L1Q8WWY6 194 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 ACTR3CQ9C0K3 210 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-215ENST00000547672 TREM1Q9NP99 234 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 SLC39A9Q9NUM3 307 aa10.81□□□□□ -0.68
PTCH1-215ENST00000547672 SETXQ7Z333 2677 aaKnown RBP10.81□□□□□ -0.68
PTCH1-215ENST00000547672 IGHV4-61A0A0C4DH41 118 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 NPFFO15130 113 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 CNIH1O95406 144 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 IFNA1P01562 189 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 MSMBP08118 114 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 BPIFB3P59826 476 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 RUNX1Q01196 453 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 KLRD1Q13241 179 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 HES1Q14469 280 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 MMDQ15546 238 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 TNXAQ16473 311 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 TOR2AQ5JU69 321 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 ZNF114Q8NC26 417 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 CFHR4Q92496 578 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 NARS2Q96I59 477 aaKnown RBP10.8□□□□□ -0.68
PTCH1-215ENST00000547672 SLC35E1Q96K37 410 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 TBX15Q96SF7 602 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 C19orf24Q9BVV8 132 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 LRBAP50851 2863 aa10.8□□□□□ -0.68
PTCH1-215ENST00000547672 PRSS46E5RG02 174 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 J3QLI3 93 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 NDUFA3O95167 84 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 IGKV1D-33P01593 117 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 IGKV1-33P01594 117 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 OPN1MWP04001 364 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 OPN1MW2P0DN77 364 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 OPN1MW3P0DN78 364 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 OR13C7P0DN81 318 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 RNASE2P10153 161 aaKnown RBP10.79□□□□□ -0.68
PTCH1-215ENST00000547672 M6PRP20645 277 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 PPT1P50897 306 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 AKR1C1Q04828 323 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 PMS2P11Q13670 270 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 FFAR4Q5NUL3 377 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 RBMS3Q6XE24 437 aaKnown RBP10.79□□□□□ -0.68
PTCH1-215ENST00000547672 CCDC28AQ8IWP9 274 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 C1orf159Q96HA4 380 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 EAF1Q96JC9 268 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-215ENST00000547672 RSG1Q9BU20 258 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 EIF5A2Q9GZV4 153 aaKnown RBP10.79□□□□□ -0.68
PTCH1-215ENST00000547672 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
PTCH1-215ENST00000547672 HRNRQ86YZ3 2850 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-215ENST00000547672 MYO18BQ8IUG5 2567 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms