RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ELANEP08246 267 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 TRAPPC2P0DI81 140 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 TRAPPC2BP0DI82 140 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 CD28P10747 220 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 HSPE1P61604 102 aaKnown RBP18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 FOXE3Q13461 319 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 ZNF431Q8TF32 576 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 HINT2Q9BX68 163 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 NDUFA4L2Q9NRX3 87 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 CACNG5Q9UF02 275 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 SOX15O60248 233 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 IGLV1-40P01703 118 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 HOXB5P09067 269 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 SPNP16150 400 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 SHISA2Q6UWI4 295 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 OR5T1Q8NG75 326 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 SRSF8Q9BRL6 282 aaKnown RBP18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 DHFRP00374 187 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 SULT1A3P0DMM9 295 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 SULT1A4P0DMN0 295 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 PSMB8P28062 276 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 CD83Q01151 205 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 TCTEX1D4Q5JR98 221 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 CXorf66Q5JRM2 361 aaPredicted RBP18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 FAM110DQ8TAY7 271 aaPredicted RBP18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 PDCD10Q9BUL8 212 aa18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 GPN1Q9HCN4 374 aaPredicted RBP18.13■□□□□ 0.49
SMARCD1-203ENST00000547247 ST8SIA3O43173 380 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 PRAF2O60831 178 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 IFNA17P01571 189 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 PF4V1P10720 104 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 TMEM65Q6PI78 240 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 TTC9CQ8N5M4 171 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 OR10W1Q8NGF6 305 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 COA4Q9NYJ1 87 aa18.12■□□□□ 0.49
SMARCD1-203ENST00000547247 TET2Q6N021 2002 aaPredicted RBP18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 A0A1B0GU03 582 aa18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 SMCO1Q147U7 214 aa18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 RGS21Q2M5E4 152 aa18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 AARDQ4LEZ3 155 aa18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 GGNBP1Q5YKI7 109 aa18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 HSD17B13Q7Z5P4 300 aaPredicted RBP18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 RNF152Q8N8N0 203 aa18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 CITED2Q99967 270 aaPredicted RBP18.11■□□□□ 0.49
SMARCD1-203ENST00000547247 TCRBV4S1A1TA0A5B7 111 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 IGLC7A0M8Q6 106 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 ADAP1O75689 374 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 IFNA21P01568 189 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 AREGP15514 252 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 PRCDQ00LT1 54 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 C12orf45Q8N5I9 185 aaPredicted RBP18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 ZNF355PQ9NSJ1 428 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 CACFD1Q9UGQ2 172 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 ANK2Q01484 3957 aa18.1■□□□□ 0.49
SMARCD1-203ENST00000547247 NPIPB5A8MRT5 1133 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 H3BUA1 57 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 SLC25A6P12236 298 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 HIST2H2BDQ6DRA6 164 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 LCNL1Q6ZST4 164 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 UXS1Q8NBZ7 420 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 KLK15Q9H2R5 256 aa18.09■□□□□ 0.49
SMARCD1-203ENST00000547247 RPLP1P05386 114 aaKnown RBP18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 OR13C7P0DN81 318 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 PSMB6P28072 239 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 RAB9AP51151 201 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 KHDC1LQ5JSQ8 128 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 MRPL41Q8IXM3 137 aaKnown RBP18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 OR52E5Q8NH55 327 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 SLA2Q9H6Q3 261 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 ZFP57Q9NU63 452 aa18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 TSSC4Q9Y5U2 329 aaPredicted RBP18.08■□□□□ 0.49
SMARCD1-203ENST00000547247 SNRPGP15A8MWD9 76 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 CRYGCP07315 174 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 CTRB1P17538 263 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 SPCS3P61009 180 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 CTRB2Q6GPI1 263 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 OR1S1Q8NH92 325 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 MS4A10Q96PG2 267 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 PLEKHA3Q9HB20 300 aa18.08■□□□□ 0.48
SMARCD1-203ENST00000547247 BRI3O95415 125 aa18.07■□□□□ 0.48
SMARCD1-203ENST00000547247 REG1AP05451 166 aa18.07■□□□□ 0.48
SMARCD1-203ENST00000547247 WT1-ASQ06250 92 aa18.07■□□□□ 0.48
SMARCD1-203ENST00000547247 SPINK9Q5DT21 86 aa18.07■□□□□ 0.48
SMARCD1-203ENST00000547247 TRGV3P03979 118 aa18.06■□□□□ 0.48
SMARCD1-203ENST00000547247 NDUFA11Q86Y39 141 aa18.06■□□□□ 0.48
SMARCD1-203ENST00000547247 PITX3O75364 302 aa18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 DEFA4P12838 97 aa18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 TPPP2P59282 170 aa18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 ERHP84090 104 aaKnown RBP18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 PDLIM3Q53GG5 364 aaPredicted RBP18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 MYOZ3Q8TDC0 251 aa18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 ENY2Q9NPA8 101 aa18.05■□□□□ 0.48
SMARCD1-203ENST00000547247 MPTX1A8MV57 137 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 NXPH3O95157 252 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 PRH1P02810 166 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 HOXA1P49639 335 aaPredicted RBP18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 RPL23AP62750 156 aaKnown RBP18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 TNFRSF9Q07011 255 aa18.04■□□□□ 0.48
SMARCD1-203ENST00000547247 HSPB7Q9UBY9 170 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms