RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 NDUFA2O43678 99 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 CNTFRP26992 372 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 HSPE1P61604 102 aaKnown RBP10.38□□□□□ -0.75
SCAF11-209ENST00000547018 PLGLAQ15195 96 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 TMEM170AQ8WVE7 144 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 TVP23CQ96ET8 276 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 DERL1Q9BUN8 251 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 OR10J4P0C629 311 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 P0C879 139 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 CGB3P0DN86 165 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 CGB7P0DN87 165 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 CHRNA7P36544 502 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 ATP5G3P48201 142 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 SERF2P84101 59 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 KLRB1Q12918 225 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 TGIF2LXQ8IUE1 241 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 ABHD5Q8WTS1 349 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 FLYWCH2Q96CP2 140 aaKnown RBP10.38□□□□□ -0.75
SCAF11-209ENST00000547018 LINC00312Q9Y6C7 94 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 RAB13P51153 203 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 RAB5BP61020 215 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 ASPHD1Q5U4P2 390 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 OR2T6Q8NHC8 308 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 PMS2P5A8MQ11 134 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 C17orf112F2Z3M2 114 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF835Q9Y2P0 537 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 S4R3C0 116 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 IFNA1P01562 189 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF506Q5JVG8 444 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 OR4P4Q8NGL7 312 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 FAM222BQ8WU58 562 aa10.37□□□□□ -0.75
SCAF11-209ENST00000547018 UNKLQ9H9P5 680 aaKnown RBP10.37□□□□□ -0.75
SCAF11-209ENST00000547018 SEPSECSQ9HD40 501 aaKnown RBP10.37□□□□□ -0.75
SCAF11-209ENST00000547018 BTBD17A6NE02 478 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 C15orf61A6NNL5 157 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 FOXH1O75593 365 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 RAB5AP20339 215 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 CA7P43166 264 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 MEF2BQ02080 365 aaPredicted RBP10.36□□□□□ -0.75
SCAF11-209ENST00000547018 HES1Q14469 280 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF124Q15973 351 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 KHDC3LQ587J8 217 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 ARSJQ5FYB0 599 aaPredicted RBP10.36□□□□□ -0.75
SCAF11-209ENST00000547018 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
SCAF11-209ENST00000547018 MGST2Q99735 147 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 CSMD2Q7Z408 3487 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 C11orf94C9JXX5 98 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 OR7C2O60412 319 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 ADORA2A-AS1P86434 159 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 ACOT6Q3I5F7 207 aaPredicted RBP10.36□□□□□ -0.75
SCAF11-209ENST00000547018 RNF212Q495C1 297 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
SCAF11-209ENST00000547018 PNKDQ8N490 385 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 UBTD1Q9HAC8 227 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 RAB9BQ9NP90 201 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 VAX2Q9UIW0 290 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 CTXND1A0A1B0GTU2 59 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 KBTBD11O94819 623 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 NDUFB4O95168 129 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 CXCL1P09341 107 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 OPRK1P41145 380 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 KLRD1Q13241 179 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 SLC35E3Q7Z769 313 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 ARL6IP6Q8N6S5 226 aa10.36□□□□□ -0.75
SCAF11-209ENST00000547018 MYO9AB2RTY4 2548 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 LINC00587B1AMM8 73 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 H3BTX0 84 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 OR10J1P30954 320 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 NDUFA6P56556 154 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 CD81P60033 236 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 RPP30P78346 268 aaKnown RBP10.35□□□□□ -0.75
SCAF11-209ENST00000547018 TNXAQ16473 311 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF672Q499Z4 452 aaPredicted RBP10.35□□□□□ -0.75
SCAF11-209ENST00000547018 HEPN1Q6WQI6 88 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 MISP3Q96FF7 219 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 PSMG3Q9BT73 122 aaPredicted RBP10.35□□□□□ -0.75
SCAF11-209ENST00000547018 NAV2Q8IVL1 2488 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 TEX50A0A1B0GTY4 177 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 SOD3P08294 240 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 FAM90A2PQ658T7 463 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 KIR3DL3Q8N743 410 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 Q8WTZ3 238 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 DDB2Q92466 427 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
SCAF11-209ENST00000547018 GSX1Q9H4S2 264 aaPredicted RBP10.35□□□□□ -0.75
SCAF11-209ENST00000547018 B9A039 149 aa10.34□□□□□ -0.75
SCAF11-209ENST00000547018 VDAC2P45880 294 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-209ENST00000547018 FLI1Q01543 452 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-209ENST00000547018 HABP2Q14520 560 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-209ENST00000547018 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF439Q8NDP4 499 aa10.34□□□□□ -0.75
SCAF11-209ENST00000547018 C12orf57Q99622 126 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms