RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 DUSP18Q8NEJ0 188 aa10.77□□□□□ -0.69
PTCH1-213ENST00000546820 FAM110DQ8TAY7 271 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-213ENST00000546820 HINT2Q9BX68 163 aa10.77□□□□□ -0.69
PTCH1-213ENST00000546820 COA4Q9NYJ1 87 aa10.77□□□□□ -0.69
PTCH1-213ENST00000546820 STAB1Q9NY15 2570 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 A0A0B4J293 547 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 A0A0G2JLM5 398 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 HMX3A6NHT5 357 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 TEX22C9J3V5 150 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 CYB5BO43169 146 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 BRI3O95415 125 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 DUS4LO95620 317 aaKnown RBP10.76□□□□□ -0.69
PTCH1-213ENST00000546820 IFNA17P01571 189 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 RPLP1P05386 114 aaKnown RBP10.76□□□□□ -0.69
PTCH1-213ENST00000546820 P0C879 139 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 DEFA4P12838 97 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 CDX1P47902 265 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-213ENST00000546820 MECP2P51608 486 aaKnown RBP10.76□□□□□ -0.69
PTCH1-213ENST00000546820 DHRS2Q13268 280 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 NSUN5P1Q3KNT7 163 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 ANKRD55Q3KP44 614 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 ASPHD1Q5U4P2 390 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 GPR146Q96CH1 333 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 UBE2E2Q96LR5 201 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 MS4A10Q96PG2 267 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 PALMDQ9NP74 551 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
PTCH1-213ENST00000546820 TENM1Q9UKZ4 2725 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 A0A1W2PRX2 142 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 NPIPB5A8MRT5 1133 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 NUDT19A8MXV4 375 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 E7EUB6 86 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 SOX15O60248 233 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 IFNA21P01568 189 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 TRGV3P03979 118 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 SULT1A3P0DMM9 295 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 SULT1A4P0DMN0 295 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 MYOD1P15172 320 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 PSMB6P28072 239 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 TPPP2P59282 170 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 RPL23AP62750 156 aaKnown RBP10.75□□□□□ -0.69
PTCH1-213ENST00000546820 ERHP84090 104 aaKnown RBP10.75□□□□□ -0.69
PTCH1-213ENST00000546820 IZUMO4Q1ZYL8 232 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 NRARPQ7Z6K4 114 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 OR4F17Q8NGA8 305 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 OR4F4Q96R69 305 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 KLK15Q9H2R5 256 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 PRR13Q9NZ81 148 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 CACNG5Q9UF02 275 aa10.75□□□□□ -0.69
PTCH1-213ENST00000546820 TET2Q6N021 2002 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-213ENST00000546820 A0A1B0GU03 582 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 CGB1A6NKQ9 187 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 ST8SIA3O43173 380 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 CRYGCP07315 174 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 OR13C7P0DN81 318 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 HIST1H1BP16401 226 aaKnown RBP10.74□□□□□ -0.69
PTCH1-213ENST00000546820 PRCDQ00LT1 54 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 Q6ZRM9 215 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 ZNF491Q8N8L2 437 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 OR1L6Q8NGR2 347 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 OR52E5Q8NH55 327 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 USMG5Q96IX5 58 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 PLEKHA3Q9HB20 300 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 GPN1Q9HCN4 374 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-213ENST00000546820 ENY2Q9NPA8 101 aa10.74□□□□□ -0.69
PTCH1-213ENST00000546820 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 C13orf42A0A1B0GVH6 325 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 A0A1B0GW64 132 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 IGLC7A0M8Q6 106 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 DBX1A6NMT0 343 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 INMT-MINDY4F8WBC2 141 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 IL5P05113 134 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 HOXB5P09067 269 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 SLC25A6P12236 298 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 AREGP15514 252 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 CTRB1P17538 263 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 SPCS3P61009 180 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 SMCO1Q147U7 214 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 NMSQ5H8A3 153 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 CTRB2Q6GPI1 263 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 LCNL1Q6ZST4 164 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 KLHL30-AS1Q8NEE0 82 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 OR10W1Q8NGF6 305 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 ZNF431Q8TF32 576 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-213ENST00000546820 MITD1Q8WV92 249 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 THYN1Q9P016 225 aa10.73□□□□□ -0.69
PTCH1-213ENST00000546820 FAM223BA6NKX1 122 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 PRAF2O60831 178 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 REG1AP05451 166 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 SNCAP37840 140 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 SUB1P53999 127 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTCH1-213ENST00000546820 ATP5G2Q06055 141 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 DCTN2Q13561 401 aaKnown RBP10.72□□□□□ -0.69
PTCH1-213ENST00000546820 HIST2H2BDQ6DRA6 164 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 NECAP1Q8NC96 275 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 OR1S1Q8NH92 325 aa10.72□□□□□ -0.69
PTCH1-213ENST00000546820 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms