RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 NRN1Q9NPD7 142 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 ZNF71Q9NQZ8 489 aaPredicted RBP10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 IGKV1-27A0A075B6S5 117 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 J3KRW8 73 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 IGHV3-48P01763 117 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 REG1AP05451 166 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 MGPP08493 103 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 LINC00305Q7Z4B0 112 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 MESP1Q9BRJ9 268 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 PNRC2Q9NPJ4 139 aaKnown RBP10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 UMODP07911 640 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 PSG7Q13046 419 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 RAB37Q96AX2 223 aa10.28□□□□□ -0.76
NPC1L1-204ENST00000546276 PEX7O00628 323 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 GCSHP23434 173 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 RPS20P60866 119 aaKnown RBP10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 NMSQ5H8A3 153 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 ZNF841Q6ZN19 808 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 GOLT1AQ6ZVE7 132 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 ZIC4Q8N9L1 334 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 FAM131CQ96AQ9 280 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 DCTN5Q9BTE1 182 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 PRDM13Q9H4Q3 707 aa10.27□□□□□ -0.76
NPC1L1-204ENST00000546276 IZUMO1RA6ND01 250 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 F2RL2O00254 374 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 NKX2-8O15522 239 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 RAMP3O60896 148 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 OR9G1Q8NH87 305 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 MGAMO43451 1857 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 MOSP00540 346 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 FCGR2BP31994 310 aaPredicted RBP10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 PLAURQ03405 335 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 PEF1Q9UBV8 284 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 LAMTOR2Q9Y2Q5 125 aa10.27□□□□□ -0.77
NPC1L1-204ENST00000546276 IQCF6A8MYZ5 107 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 ARF6P62330 175 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 ZNF124Q15973 351 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 WDR83OSQ9Y284 106 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 RFNGQ9Y644 331 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 ATXN7O15265 892 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 ECSCRQ19T08 205 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 SPAARA0A1B0GVQ0 90 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 C5orf63A6NC05 138 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 PRR19A6NJB7 356 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 NBEAP1P0C6P0 100 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 FOXC1Q12948 553 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 FGFBP3Q8TAT2 258 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 EAF1Q96JC9 268 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 PTPRDP23468 1912 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 PGPEP1LA6NFU8 196 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 RBFOX2O43251 390 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■■■□ 26.3
NPC1L1-204ENST00000546276 CECR9P0C854 216 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM171Q8WVE6 324 aa10.26□□□□□ -0.77
NPC1L1-204ENST00000546276 C9JQL5 133 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM78Q5T7P6 136 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 TEX38Q6PEX7 206 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 OCC1Q8TAD7 63 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 SOX21Q9Y651 276 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 CACNA1DQ01668 2161 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 DLX1P56177 255 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 TCF24Q7RTU0 167 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 PSG9Q00887 426 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 CFHR1Q03591 330 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 CACNG8Q8WXS5 425 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 CHODLQ9H9P2 273 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 HILPDAQ9Y5L2 63 aa10.25□□□□□ -0.77
NPC1L1-204ENST00000546276 TRAV30A0A087WSZ9 112 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 A6NJY4 79 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 PEAR1Q5VY43 1037 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 RTTNQ86VV8 2226 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 KBTBD11-OT1A0A1B0GTJ5 212 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 NUDT3O95989 172 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 LHX2P50458 406 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 MFAP4P55083 255 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 GATA2P23769 480 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 RPP21Q9H633 154 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 A1L4Q6 167 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 H3BVH4 76 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 GDF9O60383 454 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 CELA3BP08861 270 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 GLRXP35754 106 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 GCSAMLQ5JQS6 135 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 ATP1A1-AS1Q5TC04 95 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 DNM1P46Q6ZS02 220 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 RPP25LQ8N5L8 163 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 ST6GALNAC6Q969X2 333 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms