RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 C22orf46C9J442 243 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 AP4M1O00189 453 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 CLN5O75503 358 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 IFNA17P01571 189 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 RBP4P02753 201 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 SRSF1Q07955 248 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS33A-209ENST00000544349 ZNF674Q2M3X9 581 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 NANPQ8TBE9 248 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 CIB3Q96Q77 187 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-209ENST00000544349 SIRT7Q9NRC8 400 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 IFNA1P01562 189 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 LIPFP07098 398 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 ERVK-16P61578 105 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 MEF2BQ02080 365 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-209ENST00000544349 KIAA0141Q14154 515 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-209ENST00000544349 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 FAM71F2Q6NXP2 309 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 ST6GALNAC6Q969X2 333 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 P2RX4Q99571 388 aa11.62□□□□□ -0.55
VPS33A-209ENST00000544349 SSBP3Q9BWW4 388 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-209ENST00000544349 CYB5BO43169 146 aa11.61□□□□□ -0.55
VPS33A-209ENST00000544349 ZNF137PP52743 207 aa11.61□□□□□ -0.55
VPS33A-209ENST00000544349 TMEM170AQ8WVE7 144 aa11.61□□□□□ -0.55
VPS33A-209ENST00000544349 MRPL20Q9BYC9 149 aaKnown RBP11.61□□□□□ -0.55
VPS33A-209ENST00000544349 SLC35D1Q9NTN3 355 aa11.61□□□□□ -0.55
VPS33A-209ENST00000544349 BAHCC1Q9P281 2608 aa11.61□□□□□ -0.55
VPS33A-209ENST00000544349 IGHV2-26A0A0B4J1V2 119 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 CXorf65A6NEN9 183 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 SMIM6P0DI80 62 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 RTL8BQ17RB0 113 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 TNFRSF14Q92956 283 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 RAB24Q969Q5 203 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 TMEM140Q9NV12 185 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 ZFYVE26Q68DK2 2539 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 LOC105371242A0A075B767 164 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 IFITM10A6NMD0 228 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 RRHO14718 337 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 YIF1AO95070 293 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 DLX1P56177 255 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 RELBQ01201 579 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-209ENST00000544349 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 POU2AF1Q16633 256 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 OR5AN1Q8NGI8 311 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
VPS33A-209ENST00000544349 RHOVQ96L33 236 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 SMIM7Q9BQ49 75 aa11.6□□□□□ -0.55
VPS33A-209ENST00000544349 B4DEV8 164 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 HRASP01112 189 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 S100A8P05109 93 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 VDAC2P45880 294 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-209ENST00000544349 REG1BP48304 166 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 RND2P52198 227 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 OR13D1Q8NGV5 346 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 OR4A16Q8NH70 328 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 NABP2Q9BQ15 211 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 ONECUT1Q9UBC0 465 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 WDR83OSQ9Y284 106 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 DOPEY1Q5JWR5 2465 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 DCHS2Q6V1P9 2916 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 TNCP24821 2201 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 PRSS46E5RG02 174 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 H0YJW9 148 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 IGLV1-47P01700 117 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 APOA2P02652 100 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 IGKV1-16P04430 117 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 IL3RAP26951 378 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 PRRX1P54821 245 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 ADIRFQ15847 76 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 OR4A47Q6IF82 309 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 SPNS3Q6ZMD2 512 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 CCL19Q99731 98 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 CLEC7AQ9BXN2 247 aa11.59□□□□□ -0.55
VPS33A-209ENST00000544349 ARHGAP32A7KAX9 2087 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 SMCO3A2RU48 225 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 KBTBD11O94819 623 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 TRGC2P03986 189 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 MYOD1P15172 320 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-209ENST00000544349 CYP2G1PQ6ZSU1 146 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 BEND2Q8NDZ0 799 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 OR4F5Q8NH21 305 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 OR4F4Q96R69 305 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
VPS33A-209ENST00000544349 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms