RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 WT1-ASQ06250 92 aa11.27□□□□□ -0.61
CD4-212ENST00000544344 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
CD4-212ENST00000544344 CNIH2Q6PI25 160 aa11.27□□□□□ -0.61
CD4-212ENST00000544344 GDPD1Q8N9F7 314 aa11.27□□□□□ -0.61
CD4-212ENST00000544344 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
CD4-212ENST00000544344 C15orf62A8K5M9 175 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 CHEK1O14757 476 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 TNFSF12O43508 249 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 CDNFQ49AH0 187 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 HACD4Q5VWC8 232 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 FAM90A2PQ658T7 463 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 Q8NAQ8 132 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 DCSTAMPQ9H295 470 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 HRH4Q9H3N8 390 aa11.26□□□□□ -0.61
CD4-212ENST00000544344 IGHV3-21A0A0B4J1V1 117 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 METTL21EPA6NDL7 271 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 C11orf94C9JXX5 98 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 RTL8CO15255 209 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
CD4-212ENST00000544344 SERPINE2P07093 398 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 TFPI2P48307 235 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 MLLT11Q13015 90 aaPredicted RBP11.25□□□□□ -0.61
CD4-212ENST00000544344 NR2C2APQ86WQ0 139 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 SPAG16Q8N0X2 631 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 SCARB1Q8WTV0 552 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 NUDCD2Q8WVJ2 157 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 RHPN1-AS1Q9BWJ2 59 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
CD4-212ENST00000544344 COMMD5Q9GZQ3 224 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 CCL28Q9NRJ3 127 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 ANXA10Q9UJ72 324 aa11.25□□□□□ -0.61
CD4-212ENST00000544344 TRAV1-2A0A0B4J238 106 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 K7EIM0 57 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 SSX5O60225 188 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
CD4-212ENST00000544344 CTSGP08311 255 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 FGF2P09038 288 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
CD4-212ENST00000544344 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
CD4-212ENST00000544344 TAS2R31P59538 309 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 TMEM187Q14656 261 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 ARL6IP1Q15041 203 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
CD4-212ENST00000544344 SLC25A24Q6NUK1 477 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 AIFM2Q9BRQ8 373 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 DUSP21Q9H596 190 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 ACOT13Q9NPJ3 140 aa11.24□□□□□ -0.61
CD4-212ENST00000544344 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 TMEM235A6NFC5 223 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 PRSS29PA6NIE9 313 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 SULT1C2O00338 296 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
CD4-212ENST00000544344 MSMO1Q15800 293 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 OGFRL1Q5TC84 451 aaPredicted RBP11.23□□□□□ -0.61
CD4-212ENST00000544344 OR10C1Q96KK4 312 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 MGLLQ99685 303 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 TMEM140Q9NV12 185 aa11.23□□□□□ -0.61
CD4-212ENST00000544344 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
CD4-212ENST00000544344 IGKV3-7A0A075B6H7 116 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 TEX50A0A1B0GTY4 177 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 C15orf61A6NNL5 157 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 PDCD5O14737 125 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 MRPS14O60783 128 aaKnown RBP11.22□□□□□ -0.61
CD4-212ENST00000544344 HPRT1P00492 218 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 TRAPPC2P0DI81 140 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 TRAPPC2BP0DI82 140 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 PTHLHP12272 177 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 NQO2P16083 231 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 THOC7Q6I9Y2 204 aaKnown RBP11.22□□□□□ -0.61
CD4-212ENST00000544344 Q6ZTC4 211 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 TMEM116Q8NCL8 245 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
CD4-212ENST00000544344 AGRNO00468 2067 aa11.21□□□□□ -0.61
CD4-212ENST00000544344 HSPG2P98160 4391 aa11.21□□□□□ -0.61
CD4-212ENST00000544344 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.61
CD4-212ENST00000544344 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.61
CD4-212ENST00000544344 UBAC2Q8NBM4 344 aa11.21□□□□□ -0.61
CD4-212ENST00000544344 OR13F1Q8NGS4 319 aa11.21□□□□□ -0.61
CD4-212ENST00000544344 NDUFA4L2Q9NRX3 87 aa11.21□□□□□ -0.61
CD4-212ENST00000544344 IGHV3OR16-13A0A075B7E8 117 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 IGHV3-74A0A0B4J1X5 117 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 TRAV10A0A0B4J240 114 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
CD4-212ENST00000544344 CYB5BO43169 146 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 RAB3BP20337 219 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 FCGR2CP31995 323 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 RCN1Q15293 331 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 Q56UQ5 140 aa11.2□□□□□ -0.62
CD4-212ENST00000544344 LEMD1Q68G75 181 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms