RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SULT1A3P0DMM9 295 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SULT1A4P0DMN0 295 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 C19orf54Q5BKX5 351 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 NMSQ5H8A3 153 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 KHDC1LQ5JSQ8 128 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ASPHD1Q5U4P2 390 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 Q6ZRM9 215 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF429Q86V71 674 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 MINDY2Q8NBR6 621 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR5M8Q8NGP6 311 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 COA4Q9NYJ1 87 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TMED3Q9Y3Q3 217 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 A0A1B0GW64 132 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TCRBV4S1A1TA0A5B7 111 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ST8SIA3O43173 380 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 PRAF2O60831 178 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 IFNA21P01568 189 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 IGHG4P01861 327 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 PF4V1P10720 104 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 HSPE1P61604 102 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 GGNBP1Q5YKI7 109 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 HIST2H2BDQ6DRA6 164 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR10W1Q8NGF6 305 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CITED1Q99966 193 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 NDUFA4L2Q9NRX3 87 aa11.34□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SOX15O60248 233 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 ADAP1O75689 374 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 NXPH3O95157 252 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 REG1AP05451 166 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 ELANEP08246 267 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 FOXE3Q13461 319 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SMCO1Q147U7 214 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SHISA2Q6UWI4 295 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 OR1S1Q8NH92 325 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 FAM110DQ8TAY7 271 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CITED2Q99967 270 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
TNFRSF1A-216ENST00000543995 A0A1B0GU03 582 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 IGLV1-40P01703 118 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 AREGP15514 252 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 PSMB8P28062 276 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 HSD17B13Q7Z5P4 300 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 MRPL41Q8IXM3 137 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 C12orf45Q8N5I9 185 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
TNFRSF1A-216ENST00000543995 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 OR13C7P0DN81 318 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 DEFA4P12838 97 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 PSMB6P28072 239 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 HOXA1P49639 335 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 RAB9AP51151 201 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 TPPP2P59282 170 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SPATA3Q8NHX4 192 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SLA2Q9H6Q3 261 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
TNFRSF1A-216ENST00000543995 A0A1W2PRX2 142 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SNRPGP15A8MWD9 76 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 H3BUA1 57 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 PRH1P02810 166 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 TRGV3P03979 118 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SLC25A6P12236 298 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 SPCS3P61009 180 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CD83Q01151 205 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 OXA1LQ15070 435 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 OR52E5Q8NH55 327 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 KLK15Q9H2R5 256 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 TSSC4Q9Y5U2 329 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 C13orf42A0A1B0GVH6 325 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 MPTX1A8MV57 137 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CRYGCP07315 174 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CTRB1P17538 263 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 ERHP84090 104 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 TATDN3Q17R31 274 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 NSUN5P1Q3KNT7 163 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CTRB2Q6GPI1 263 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
TNFRSF1A-216ENST00000543995 NUDT19A8MXV4 375 aa11.29□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CCSO14618 274 aa11.29□□□□□ -0.6
TNFRSF1A-216ENST00000543995 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
TNFRSF1A-216ENST00000543995 NDUFA11Q86Y39 141 aa11.29□□□□□ -0.6
TNFRSF1A-216ENST00000543995 C5orf51A6NDU8 294 aa11.28□□□□□ -0.6
TNFRSF1A-216ENST00000543995 CYB5BO43169 146 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms