RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TCRBV4S1A1TA0A5B7 111 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 DUS4LO95620 317 aaKnown RBP10.65□□□□□ -0.7
SP140-213ENST00000543928 ELANEP08246 267 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 TRAPPC2P0DI81 140 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 TRAPPC2BP0DI82 140 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 PF4V1P10720 104 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 PSMB8P28062 276 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 MECP2P51608 486 aaKnown RBP10.65□□□□□ -0.7
SP140-213ENST00000543928 CD83Q01151 205 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 CXorf66Q5JRM2 361 aaPredicted RBP10.65□□□□□ -0.7
SP140-213ENST00000543928 KHDC1LQ5JSQ8 128 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 PLET1Q6UQ28 207 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 OR5B3Q8NH48 314 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 COQ8AQ8NI60 647 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 FAM110DQ8TAY7 271 aaPredicted RBP10.65□□□□□ -0.7
SP140-213ENST00000543928 CACNG5Q9UF02 275 aa10.65□□□□□ -0.7
SP140-213ENST00000543928 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
SP140-213ENST00000543928 AREGP15514 252 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
SP140-213ENST00000543928 DCTN2Q13561 401 aaKnown RBP10.64□□□□□ -0.71
SP140-213ENST00000543928 NMSQ5H8A3 153 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 TMEM65Q6PI78 240 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 ZNF429Q86V71 674 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 TTC9CQ8N5M4 171 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 RNF152Q8N8N0 203 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 OR10W1Q8NGF6 305 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 SEC22CQ9BRL7 303 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 NDUFA4L2Q9NRX3 87 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.64□□□□□ -0.71
SP140-213ENST00000543928 ZNF355PQ9NSJ1 428 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 COA4Q9NYJ1 87 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 ZNF257Q9Y2Q1 563 aa10.64□□□□□ -0.71
SP140-213ENST00000543928 IGLC7A0M8Q6 106 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 INMT-MINDY4F8WBC2 141 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 REG1AP05451 166 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 HOXB5P09067 269 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 SULT1A3P0DMM9 295 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 SULT1A4P0DMN0 295 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 SPNP16150 400 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 RAB9AP51151 201 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 THOC7Q6I9Y2 204 aaKnown RBP10.63□□□□□ -0.71
SP140-213ENST00000543928 ZNF431Q8TF32 576 aaPredicted RBP10.63□□□□□ -0.71
SP140-213ENST00000543928 MITD1Q8WV92 249 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 MS4A10Q96PG2 267 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
SP140-213ENST00000543928 PDCD10Q9BUL8 212 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
SP140-213ENST00000543928 TSSC4Q9Y5U2 329 aaPredicted RBP10.63□□□□□ -0.71
SP140-213ENST00000543928 A0A1W2PRX2 142 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 NPIPB5A8MRT5 1133 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 H3BUA1 57 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 PTTG1O95997 202 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 IFNA17P01571 189 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 PRH1P02810 166 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 TRGV3P03979 118 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 IL5P05113 134 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 OR13C7P0DN81 318 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 PSMB6P28072 239 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 RPL23AP62750 156 aaKnown RBP10.62□□□□□ -0.71
SP140-213ENST00000543928 PRCDQ00LT1 54 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 WT1-ASQ06250 92 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 SMCO1Q147U7 214 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 NSUN5P1Q3KNT7 163 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 SPINK9Q5DT21 86 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 GGNBP1Q5YKI7 109 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 C19orf35Q6ZS72 473 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 HSD17B13Q7Z5P4 300 aaPredicted RBP10.62□□□□□ -0.71
SP140-213ENST00000543928 NDUFA11Q86Y39 141 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 MYOZ3Q8TDC0 251 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 MARVELD1Q9BSK0 173 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 SLA2Q9H6Q3 261 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 ZFP57Q9NU63 452 aa10.62□□□□□ -0.71
SP140-213ENST00000543928 DNHD1Q96M86 4753 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 A0A1B0GU03 582 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 ADAP1O75689 374 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 NXPH3O95157 252 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 CRYGCP07315 174 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 CTRB1P17538 263 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 TPPP2P59282 170 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 KIAA0141Q14154 515 aaPredicted RBP10.61□□□□□ -0.71
SP140-213ENST00000543928 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 CTRB2Q6GPI1 263 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 C18orf65Q6ZTR6 163 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 PLEKHA3Q9HB20 300 aa10.61□□□□□ -0.71
SP140-213ENST00000543928 NUDT19A8MXV4 375 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 PRAF2O60831 178 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 BRI3O95415 125 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 DHFRP00374 187 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 IFNA21P01568 189 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 CDX1P47902 265 aaPredicted RBP10.6□□□□□ -0.71
SP140-213ENST00000543928 SPCS3P61009 180 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 DEFA5Q01523 94 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 MRPL41Q8IXM3 137 aaKnown RBP10.6□□□□□ -0.71
SP140-213ENST00000543928 C12orf45Q8N5I9 185 aaPredicted RBP10.6□□□□□ -0.71
SP140-213ENST00000543928 ZNF491Q8N8L2 437 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
SP140-213ENST00000543928 OR52E5Q8NH55 327 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms