RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 C5orf30Q96GV9 206 aa10.53□□□□□ -0.72
SMG8-202ENST00000543872 A0A087X0K7 114 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 TRGV10A0A0A0MS01 117 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 H0YJW9 148 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 MT-CO2P00403 227 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 OPRK1P41145 380 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 FOXG1P55316 489 aaPredicted RBP10.52□□□□□ -0.72
SMG8-202ENST00000543872 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 OR1B1Q8NGR6 318 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 PRDM14Q9GZV8 571 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 KCNIP1Q9NZI2 227 aa10.52□□□□□ -0.72
SMG8-202ENST00000543872 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 G3V4G9 280 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 BRWD1-AS2P59051 145 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 EFNB3Q15768 340 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 GABRA6Q16445 453 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 KRTAP27-1Q3LI81 207 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 SPACA3Q8IXA5 215 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 ZNF645Q8N7E2 425 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 CHODLQ9H9P2 273 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 PLSCR4Q9NRQ2 329 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 COL5A1P20908 1838 aaPredicted RBP10.52□□□□□ -0.73
SMG8-202ENST00000543872 OR10J4P0C629 311 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 OR9G9P0C7N8 305 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 GNG3P63215 75 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 HOXA4Q00056 320 aaPredicted RBP10.52□□□□□ -0.73
SMG8-202ENST00000543872 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 MIR17HGQ75NE6 70 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 NINJ1Q92982 152 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 NAA38Q9BRA0 125 aaKnown RBP10.52□□□□□ -0.73
SMG8-202ENST00000543872 PLEKHA3Q9HB20 300 aa10.52□□□□□ -0.73
SMG8-202ENST00000543872 A0A1B0GV72 72 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 C9JCJ5 164 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 REG1AP05451 166 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 SLC25A34Q6PIV7 304 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 SCCPDHQ8NBX0 429 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 PMCHL2Q9BQD1 86 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 PILRBQ9UKJ0 227 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 ZNF716A6NP11 495 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 C9orf172C9J069 976 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 TFF1P04155 84 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 CEACAM3P40198 252 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 SRYQ05066 204 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 PRAMEF5Q5TYX0 476 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 PRAMEF6Q5VXH4 476 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 Q6P435 159 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 TPRX1Q8N7U7 411 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 HINT2Q9BX68 163 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 GTSF1LQ9H1H1 148 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 ABI3Q9P2A4 366 aa10.51□□□□□ -0.73
SMG8-202ENST00000543872 IGHV3-13P01766 116 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 CD24P25063 80 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 TMEM95Q3KNT9 176 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 STPG3Q8N7X2 389 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 OR8B3Q8NGG8 313 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 OR10D3Q8NH80 312 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 FAM216AQ8WUB2 273 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 TMEM45BQ96B21 275 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 GALMQ96C23 342 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 PHF7Q9BWX1 381 aaPredicted RBP10.5□□□□□ -0.73
SMG8-202ENST00000543872 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
SMG8-202ENST00000543872 TNFRSF19Q9NS68 423 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 RARRES3Q9UL19 164 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 DNAJC13O75165 2243 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 LINC00473A8K010 186 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 APOA2P02652 100 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 UQCRFS1P47985 274 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 FOXA3P55318 350 aaPredicted RBP10.5□□□□□ -0.73
SMG8-202ENST00000543872 TMEM249Q2WGJ8 235 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 C17orf82Q86X59 251 aaPredicted RBP10.5□□□□□ -0.73
SMG8-202ENST00000543872 OR4A16Q8NH70 328 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 ZNF355PQ9NSJ1 428 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 TRAV26-1A0A087WT03 109 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 SERTM2A0A1B0GWG4 89 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 FCGR3BO75015 233 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 P0C879 139 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 WIPI1Q5MNZ9 446 aaPredicted RBP10.5□□□□□ -0.73
SMG8-202ENST00000543872 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 C5orf17Q8NAS9 161 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 HSD17B10Q99714 261 aaKnown RBP10.5□□□□□ -0.73
SMG8-202ENST00000543872 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 PSG11Q9UQ72 335 aa10.5□□□□□ -0.73
SMG8-202ENST00000543872 C2orf70A6NJV1 201 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 NPIPB11E5RHQ5 1161 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 MRPL33O75394 65 aaKnown RBP10.49□□□□□ -0.73
SMG8-202ENST00000543872 MOB1BQ7L9L4 216 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 OR10W1Q8NGF6 305 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 LINC00479Q96M42 142 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 WDR54Q9H977 334 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 OSTCQ9NRP0 149 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 COL6A3P12111 3177 aa10.49□□□□□ -0.73
SMG8-202ENST00000543872 IGLV3-12A0A075B6K2 115 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms