RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 GVQW1Q8N7I0 195 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 GDPD1Q8N9F7 314 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 DMBX1Q8NFW5 382 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 LGALS14Q8TCE9 139 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 CD300LFQ8TDQ1 290 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 PLEKHA2Q9HB19 425 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 TMEM140Q9NV12 185 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 TXNL4BQ9NX01 149 aaKnown RBP16.73■□□□□ 0.27
CDKN3-207ENST00000543789 RHBDL2Q9NX52 303 aa16.73■□□□□ 0.27
CDKN3-207ENST00000543789 RRP15Q9Y3B9 282 aaKnown RBP16.73■□□□□ 0.27
CDKN3-207ENST00000543789 OR4C46A6NHA9 309 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 TRAPPC2P0DI81 140 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 TRAPPC2BP0DI82 140 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 THOC7Q6I9Y2 204 aaKnown RBP16.72■□□□□ 0.27
CDKN3-207ENST00000543789 SPSB3Q6PJ21 355 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 HSD17B13Q7Z5P4 300 aaPredicted RBP16.72■□□□□ 0.27
CDKN3-207ENST00000543789 HOGA1Q86XE5 327 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 PHLDA1Q8WV24 401 aaPredicted RBP16.72■□□□□ 0.27
CDKN3-207ENST00000543789 GALNT14Q96FL9 552 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 C20orf24Q9BUV8 137 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 MAP6D1Q9H9H5 199 aa16.72■□□□□ 0.27
CDKN3-207ENST00000543789 TRAV18A0A075B6X5 111 aa16.71■□□□□ 0.27
CDKN3-207ENST00000543789 K7EMT4 169 aa16.71■□□□□ 0.27
CDKN3-207ENST00000543789 NDUFA4O00483 81 aa16.71■□□□□ 0.27
CDKN3-207ENST00000543789 SERPINE2P07093 398 aa16.71■□□□□ 0.27
CDKN3-207ENST00000543789 FXYD4P59646 89 aa16.71■□□□□ 0.27
CDKN3-207ENST00000543789 SFXN4Q6P4A7 337 aa16.71■□□□□ 0.27
CDKN3-207ENST00000543789 TEX50A0A1B0GTY4 177 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 S1PR2O95136 353 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 WT1-ASQ06250 92 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 LGALS9CQ6DKI2 356 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 ZNF818PQ6ZRF7 136 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 OR1L8Q8NGR8 309 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 OR5B3Q8NH48 314 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 OR51H1Q8NH63 302 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 GIMAP1Q8WWP7 306 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 ATP6V0BQ99437 205 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 CHRDL1Q9BU40 450 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 C21orf62Q9NYP8 219 aa16.7■□□□□ 0.26
CDKN3-207ENST00000543789 IGHV3-21A0A0B4J1V1 117 aa16.69■□□□□ 0.26
CDKN3-207ENST00000543789 DEDDO75618 318 aa16.69■□□□□ 0.26
CDKN3-207ENST00000543789 CTSDP07339 412 aaPredicted RBP16.69■□□□□ 0.26
CDKN3-207ENST00000543789 AADACL3Q5VUY0 350 aa16.69■□□□□ 0.26
CDKN3-207ENST00000543789 SCARB1Q8WTV0 552 aa16.69■□□□□ 0.26
CDKN3-207ENST00000543789 C6orf62Q9GZU0 229 aaPredicted RBP16.69■□□□□ 0.26
CDKN3-207ENST00000543789 VCX3BQ9H321 246 aa16.69■□□□□ 0.26
CDKN3-207ENST00000543789 COMMD9Q9P000 198 aa16.69■□□□□ 0.26
CDKN3-207ENST00000543789 IGHV3OR16-8A0A075B7F1 116 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 ZNF207O43670 478 aaKnown RBP16.68■□□□□ 0.26
CDKN3-207ENST00000543789 FCER2P06734 321 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 HSPA13P48723 471 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 ERVK-16P61578 105 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 UBE2UQ5VVX9 321 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 CSTL1Q9H114 145 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 NDUFA4L2Q9NRX3 87 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 SSR3Q9UNL2 185 aa16.68■□□□□ 0.26
CDKN3-207ENST00000543789 F11RQ9Y624 299 aaKnown RBP16.68■□□□□ 0.26
CDKN3-207ENST00000543789 C15orf62A8K5M9 175 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 MRPS14O60783 128 aaKnown RBP16.67■□□□□ 0.26
CDKN3-207ENST00000543789 PSMB9P28065 219 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 FCGR2BP31994 310 aaPredicted RBP16.67■□□□□ 0.26
CDKN3-207ENST00000543789 MFAP2P55001 183 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 TMEM17Q86X19 198 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 APRG1Q8IVJ8 170 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 UBAC2Q8NBM4 344 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 OR5H6Q8NGV6 325 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 HINT2Q9BX68 163 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 SMPXQ9UHP9 88 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 ETV7Q9Y603 341 aa16.67■□□□□ 0.26
CDKN3-207ENST00000543789 A0A0A6YYH2 397 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 A6NJ64 397 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 F8W735 103 aaPredicted RBP16.66■□□□□ 0.26
CDKN3-207ENST00000543789 SDC2P34741 201 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 ADMP35318 185 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 CMC4P56277 68 aaPredicted RBP16.66■□□□□ 0.26
CDKN3-207ENST00000543789 SCAND1P57086 179 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 Q56UQ5 140 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 IZUMO2Q6UXV1 221 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 BORCS5Q969J3 196 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 LSM10Q969L4 123 aaKnown RBP16.66■□□□□ 0.26
CDKN3-207ENST00000543789 SLC25A38Q96DW6 304 aa16.66■□□□□ 0.26
CDKN3-207ENST00000543789 MPTX1A8MV57 137 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 GNRHRP30968 328 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 GABARAPL2P60520 117 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 OR5AP2Q8NGF4 316 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 RNF2Q99496 336 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 RARRES2Q99969 163 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 AUNIPQ9H7T9 357 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 DIABLOQ9NR28 239 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 OR51B2Q9Y5P1 312 aa16.65■□□□□ 0.26
CDKN3-207ENST00000543789 MARCH11A6NNE9 402 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 K7EIM0 57 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 F2RP25116 425 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 CBX5P45973 191 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 HERV-K104P61576 105 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 MXD1Q05195 221 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 IDNKQ5T6J7 187 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 GATAD1Q8WUU5 269 aa16.64■□□□□ 0.25
CDKN3-207ENST00000543789 CHEK1O14757 476 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms