RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
DDB1-221ENST00000543162 HIPK2Q9H2X6 1198 aa8.48□□□□□ -1.05
DDB1-221ENST00000543162 PLEKHA3Q9HB20 300 aa8.48□□□□□ -1.05
DDB1-221ENST00000543162 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
DDB1-221ENST00000543162 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
DDB1-221ENST00000543162 PLXNB1O43157 2135 aa8.48□□□□□ -1.05
DDB1-221ENST00000543162 A0A1W2PN81 502 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 INAFM1C9JVW0 142 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 CHRNA7P36544 502 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 NUP62P37198 522 aaPredicted RBP8.47□□□□□ -1.05
DDB1-221ENST00000543162 TAS2R30P59541 319 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 RPL23AP62750 156 aaKnown RBP8.47□□□□□ -1.05
DDB1-221ENST00000543162 CX3CL1P78423 397 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 TMEM65Q6PI78 240 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 MRPL41Q8IXM3 137 aaKnown RBP8.47□□□□□ -1.05
DDB1-221ENST00000543162 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 INO80EQ8NBZ0 244 aaPredicted RBP8.47□□□□□ -1.05
DDB1-221ENST00000543162 GRPEL2Q8TAA5 225 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 ABHD5Q8WTS1 349 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 SRSF12Q8WXF0 261 aaKnown RBP8.47□□□□□ -1.05
DDB1-221ENST00000543162 SMIM8Q96KF7 97 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 C11orf1Q9H5F2 150 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 PSENENQ9NZ42 101 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 WSB1Q9Y6I7 421 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 F8P00451 2351 aa8.47□□□□□ -1.05
DDB1-221ENST00000543162 ZNF469Q96JG9 3925 aaPredicted RBP8.47□□□□□ -1.05
DDB1-221ENST00000543162 MTORP42345 2549 aa8.46□□□□□ -1.05
DDB1-221ENST00000543162 IGHV7-81A0A0B4J1V7 117 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 MSGN1A6NI15 193 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 SH2D7A6NKC9 451 aaPredicted RBP8.46□□□□□ -1.06
DDB1-221ENST00000543162 CGB1A6NKQ9 187 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 HMSDA8MTL9 139 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 E7EUB6 86 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 H3BP45 60 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 ARPC5O15511 151 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 TSC22D2O75157 780 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 TMEM50AO95807 157 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 AMY1AP04745 511 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 VDAC2P45880 294 aaPredicted RBP8.46□□□□□ -1.06
DDB1-221ENST00000543162 P2RY1P47900 373 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 EIF2B2P49770 351 aaKnown RBP8.46□□□□□ -1.06
DDB1-221ENST00000543162 CAV2P51636 162 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 NKX2-5P52952 324 aaPredicted RBP8.46□□□□□ -1.06
DDB1-221ENST00000543162 PAX9P55771 341 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 SSBP2P81877 361 aaPredicted RBP8.46□□□□□ -1.06
DDB1-221ENST00000543162 SPANXN5Q5MJ07 72 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 OR2C3Q8N628 320 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 OR10W1Q8NGF6 305 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.06
DDB1-221ENST00000543162 ARPC1AQ92747 370 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 ZC4H2Q9NQZ6 224 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 TNFSF18Q9UNG2 199 aa8.46□□□□□ -1.06
DDB1-221ENST00000543162 MXRA5Q9NR99 2828 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 A0A1B0GW64 132 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 IGLC7A0M8Q6 106 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 DNAJC9-AS1A6NH13 148 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 TEX22C9J3V5 150 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 KCNAB3O43448 404 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 IFNA10P01566 189 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 OR13C7P0DN81 318 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 RPL12P30050 165 aaKnown RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 SNCAP37840 140 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 ERHP84090 104 aaKnown RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 C9orf152Q5JTZ5 239 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 HSD17B13Q7Z5P4 300 aaPredicted RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 DUX5Q96PT3 197 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 HSPB9Q9BQS6 159 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 SRSF8Q9BRL6 282 aaKnown RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 MFFQ9GZY8 342 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 SLC25A31Q9H0C2 315 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 PARP11Q9NR21 331 aa8.45□□□□□ -1.06
DDB1-221ENST00000543162 LYRM2Q9NU23 88 aaPredicted RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 PAIP2BQ9ULR5 123 aaKnown RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 STRAPQ9Y3F4 350 aaKnown RBP8.45□□□□□ -1.06
DDB1-221ENST00000543162 FAM24AA6NFZ4 105 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 INS-IGF2F8WCM5 200 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 APELAP0DMC3 54 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 HKR1P10072 659 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 AREGP15514 252 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 HTR2BP41595 481 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 AP2S1P53680 142 aaPredicted RBP8.44□□□□□ -1.06
DDB1-221ENST00000543162 BLCAPP62952 87 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 NDPQ00604 133 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 WT1-ASQ06250 92 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 ACOT7LQ6ZUV0 252 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 TMEM252Q8N6L7 170 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 SLC24A4Q8NFF2 622 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 AQP10Q96PS8 301 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 OR4C12Q96R67 309 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 FAM103A1Q9BTL3 118 aaKnown RBP8.44□□□□□ -1.06
DDB1-221ENST00000543162 NPFFR1Q9GZQ6 430 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 U3KQ87 197 aa8.44□□□□□ -1.06
DDB1-221ENST00000543162 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 RNF222A6NCQ9 220 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 C15orf62A8K5M9 175 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 ATP6V0E1O15342 81 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 CRLF1O75462 422 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 REG1AP05451 166 aa8.43□□□□□ -1.06
DDB1-221ENST00000543162 METTL15P1P0C7V9 234 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms